Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS14840 and ECOLIN_RS14845 are separated by 13 nucleotidesECOLIN_RS14845 and ECOLIN_RS14850 are separated by 236 nucleotidesECOLIN_RS14850 and ECOLIN_RS14855 are separated by 20 nucleotidesECOLIN_RS14855 and ECOLIN_RS14860 are separated by 0 nucleotides ECOLIN_RS14840: ECOLIN_RS14840 - NADP-dependent succinate-semialdehyde dehydrogenase, at 2,997,617 to 2,999,065 _RS14840 ECOLIN_RS14845: ECOLIN_RS14845 - 4-aminobutyrate--2-oxoglutarate transaminase, at 2,999,079 to 3,000,359 _RS14845 ECOLIN_RS14850: ECOLIN_RS14850 - GABA permease, at 3,000,596 to 3,001,996 _RS14850 ECOLIN_RS14855: ECOLIN_RS14855 - DNA-binding transcriptional regulator CsiR, at 3,002,017 to 3,002,679 _RS14855 ECOLIN_RS14860: ECOLIN_RS14860 - potassium binding protein Kbp, at 3,002,680 to 3,003,129 _RS14860
Group Condition ECOLIN_RS14840 ECOLIN_RS14845 ECOLIN_RS14850 ECOLIN_RS14855 ECOLIN_RS14860
no phage control Control_Nissle -0.3 -0.2 N.D. -0.5 N.D.
phage RB68 +0.0 -0.3 N.D. -0.7 N.D.
phage EV219 -0.1 -0.0 N.D. -0.8 N.D.
phage JK38 -0.3 -0.5 N.D. -0.1 N.D.
phage Bas63 -0.2 -0.5 N.D. -0.2 N.D.
phage TP7 -0.3 -0.1 N.D. -0.5 N.D.
carbon source D-Glucose +0.1 -0.1 N.D. -0.8 N.D.
carbon source L-Rhamnose -0.4 +0.0 N.D. -0.4 N.D.
phage Bas27 +0.1 -0.5 N.D. -0.3 N.D.
carbon source L-Arabinose -0.8 +0.2 N.D. -0.1 N.D.
carbon source L-Arabinose -0.4 -0.0 N.D. -0.3 N.D.
phage JK16 -0.3 -0.4 N.D. +0.0 N.D.
phage Bas05 -0.5 -0.4 N.D. +0.4 N.D.
phage K20 +0.1 -0.1 N.D. -0.6 N.D.
phage K25 -0.2 -0.4 N.D. +0.1 N.D.
phage Bas37 -0.4 -0.3 N.D. +0.2 N.D.
phage Bas21 -0.5 -0.2 N.D. +0.2 N.D.
phage EV219 -0.3 -0.2 N.D. +0.3 N.D.
phage Bas68 -0.1 -0.5 N.D. +0.3 N.D.
phage Bas37 -0.0 -0.4 N.D. +0.2 N.D.
carbon source Casamino-acids -0.4 +0.4 N.D. +0.1 N.D.
phage Bas04 +0.1 -0.3 N.D. +0.3 N.D.
phage K25 +0.3 -0.3 N.D. +0.2 N.D.
phage Bas10 -0.1 -0.1 N.D. +0.5 N.D.
phage CEV1 -0.1 +0.0 N.D. +0.5 N.D.
no phage control Control_Nissle +0.3 +0.3 N.D. -0.1 N.D.
phage RB51 -0.0 -0.1 N.D. +0.7 N.D.
phage Bas44 +0.3 +0.0 N.D. +0.4 N.D.
phage Phi92 +0.2 +0.1 N.D. +0.7 N.D.
phage Bas22 +0.3 +0.4 N.D. +0.5 N.D.
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