Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS31555 and ECOLIN_RS14695 are separated by 98 nucleotidesECOLIN_RS14695 and ECOLIN_RS14700 are separated by 42 nucleotidesECOLIN_RS14700 and ECOLIN_RS14705 are separated by 10 nucleotidesECOLIN_RS14705 and ECOLIN_RS14710 are separated by 209 nucleotides ECOLIN_RS31555: ECOLIN_RS31555 - pheA operon leader peptide PheL, at 2,974,160 to 2,974,207 _RS31555 ECOLIN_RS14695: ECOLIN_RS14695 - bifunctional chorismate mutase/prephenate dehydratase, at 2,974,306 to 2,975,466 _RS14695 ECOLIN_RS14700: ECOLIN_RS14700 - bifunctional chorismate mutase/prephenate dehydrogenase, at 2,975,509 to 2,976,630 _RS14700 ECOLIN_RS14705: ECOLIN_RS14705 - 3-deoxy-7-phosphoheptulonate synthase AroF, at 2,976,641 to 2,977,711 _RS14705 ECOLIN_RS14710: ECOLIN_RS14710 - DUF2799 domain-containing protein, at 2,977,921 to 2,978,286 _RS14710
Group Condition ECOLIN_RS31555 ECOLIN_RS14695 ECOLIN_RS14700 ECOLIN_RS14705 ECOLIN_RS14710
carbon source Sodium-DL-Lactate -0.0 -5.8 -3.8 -1.5 -0.1
carbon source Sodium-DL-Lactate +0.0 -3.1 -3.0 -0.9 -0.1
carbon source D-Glucose +0.4 -5.1 -2.5 +0.2 +0.7
carbon source L-Rhamnose -0.3 -1.3 -0.1 -0.8 -3.3
carbon source D-Glucose +1.9 -4.5 -2.1 -0.2 -0.4
carbon source L-Rhamnose -0.2 -2.3 -0.7 -0.3 -0.8
phage Phi92 +0.3 +0.4 -0.2 -0.1 -3.9
phage Bas52 -0.1 -0.1 -0.0 +0.2 -3.4
phage Bas45 +0.2 -2.5 -0.3 +0.1 -0.2
no phage control Control_Nissle -0.0 -1.1 +0.1 +0.1 -0.8
carbon source L-Arabinose +0.7 -4.2 +0.1 -0.1 +2.0
phage Bas21 +0.1 -2.2 +0.1 +0.1 +0.5
phage Bas04 +0.3 -0.6 +0.3 -0.3 -1.1
phage Bas48 -0.2 -0.4 +0.2 -0.0 -0.9
phage K25 -0.2 -0.9 +0.2 +0.4 -0.7
phage Bas52 +0.4 -0.0 +0.1 +0.0 -1.6
phage JK16 +0.6 -1.1 +0.0 +0.1 -0.5
phage Bas38 -0.0 -0.9 +0.2 +0.3 -0.5
phage Bas44 +0.1 -0.5 +0.1 +0.2 -0.8
phage Bas22 -0.3 -1.0 -0.3 +0.1 +0.6
phage Bas51 -0.7 -1.0 +0.0 +0.4 +0.5
phage Bas63 -0.4 -0.8 +0.1 +0.3 +0.3
phage Bas68 -0.2 -0.8 +0.0 +0.0 +0.7
phage P1vir +0.4 -0.6 -0.1 -0.4 +0.8
phage Bas44 +0.5 -0.9 -0.2 +0.2 +0.6
phage RB51 -0.3 -0.7 -0.1 +0.4 +1.0
carbon source L-Arabinose +0.9 -2.1 -0.4 -0.0 +2.6
phage K25 +0.2 -0.2 -0.0 +0.4 +1.0
carbon source Casamino-acids -0.0 +1.1 +0.5 +0.1 -0.2
phage Bas10 +0.5 +0.1 +0.2 +0.2 +0.6
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