Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS14670 and ECOLIN_RS14675 overlap by 4 nucleotidesECOLIN_RS14675 and ECOLIN_RS14680 are separated by 134 nucleotidesECOLIN_RS14680 and ECOLIN_RS14690 are separated by 269 nucleotidesECOLIN_RS14690 and ECOLIN_RS31555 are separated by 103 nucleotides ECOLIN_RS14670: ECOLIN_RS14670 - purine nucleoside phosphorylase YfiH, at 2,970,865 to 2,971,596 _RS14670 ECOLIN_RS14675: ECOLIN_RS14675 - 23S rRNA pseudouridine(1911/1915/1917) synthase RluD, at 2,971,593 to 2,972,573 _RS14675 ECOLIN_RS14680: ECOLIN_RS14680 - outer membrane protein assembly factor BamD, at 2,972,708 to 2,973,445 _RS14680 ECOLIN_RS14690: ECOLIN_RS14690 - ribosome-associated translation inhibitor RaiA, at 2,973,715 to 2,974,056 _RS14690 ECOLIN_RS31555: ECOLIN_RS31555 - pheA operon leader peptide PheL, at 2,974,160 to 2,974,207 _RS31555
Group Condition ECOLIN_RS14670 ECOLIN_RS14675 ECOLIN_RS14680 ECOLIN_RS14690 ECOLIN_RS31555
phage Bas45 -5.9 -2.1 N.D. N.D. +0.2
phage TP7 -1.1 -2.7 N.D. N.D. +0.1
phage Bas22 -1.1 -1.8 N.D. N.D. -0.3
phage Bas21 -0.9 -1.8 N.D. N.D. +0.1
phage EV219 -0.1 -2.5 N.D. N.D. +0.0
phage Bas38 +0.1 -2.5 N.D. N.D. -0.0
phage JK38 -0.7 -2.0 N.D. N.D. +0.3
phage JK38 -0.8 -1.7 N.D. N.D. +0.2
phage Bas21 -0.8 -1.5 N.D. N.D. +0.1
phage EV219 -0.4 -1.9 N.D. N.D. +0.1
phage Bas37 -0.5 -1.9 N.D. N.D. +0.3
phage TP7 -1.0 -1.6 N.D. N.D. +0.5
phage Bas31 -0.3 -1.9 N.D. N.D. +0.2
phage Bas37 -0.8 -1.5 N.D. N.D. +0.3
phage Bas27 -0.4 -1.6 N.D. N.D. +0.0
phage Bas22 -0.7 -1.4 N.D. N.D. +0.3
phage Bas31 -0.4 -1.8 N.D. N.D. +0.4
phage Bas51 -0.5 -0.7 N.D. N.D. -0.7
phage Bas38 +0.4 -2.1 N.D. N.D. +0.0
phage Bas48 -0.6 -1.0 N.D. N.D. +0.0
phage CEV1 +0.0 -2.1 N.D. N.D. +0.6
phage Bas48 +0.1 -1.3 N.D. N.D. -0.2
phage Bas27 +0.1 -1.5 N.D. N.D. +0.2
phage Bas52 -0.8 -0.7 N.D. N.D. +0.4
carbon source L-Rhamnose +0.5 -0.8 N.D. N.D. -0.2
phage Bas44 -0.1 -0.9 N.D. N.D. +0.5
phage CEV1 +0.7 -1.5 N.D. N.D. +0.5
phage JK16 +0.2 -0.7 N.D. N.D. +0.6
carbon source L-Arabinose +0.9 -0.1 N.D. N.D. +0.9
carbon source D-Glucose +0.5 +1.0 N.D. N.D. +1.9
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