Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS14285 and ECOLIN_RS14290 are separated by 110 nucleotidesECOLIN_RS14290 and ECOLIN_RS14295 are separated by 26 nucleotidesECOLIN_RS14295 and ECOLIN_RS14300 are separated by 284 nucleotidesECOLIN_RS14300 and ECOLIN_RS14305 are separated by 149 nucleotides ECOLIN_RS14285: ECOLIN_RS14285 - histidine--tRNA ligase, at 2,879,992 to 2,881,266 _RS14285 ECOLIN_RS14290: ECOLIN_RS14290 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 2,881,377 to 2,882,495 _RS14290 ECOLIN_RS14295: ECOLIN_RS14295 - cytoskeleton protein RodZ, at 2,882,522 to 2,883,529 _RS14295 ECOLIN_RS14300: ECOLIN_RS14300 - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN, at 2,883,814 to 2,884,968 _RS14300 ECOLIN_RS14305: ECOLIN_RS14305 - nucleoside-diphosphate kinase, at 2,885,118 to 2,885,549 _RS14305
Group Condition ECOLIN_RS14285 ECOLIN_RS14290 ECOLIN_RS14295 ECOLIN_RS14300 ECOLIN_RS14305
phage JK38 N.D. N.D. -1.6 -0.1 -3.2
phage Bas37 N.D. N.D. -1.7 -0.5 -2.3
phage TP7 N.D. N.D. -1.7 -0.5 -2.0
phage Bas38 N.D. N.D. -0.4 -0.5 -2.4
phage Bas37 N.D. N.D. -1.3 -0.5 -1.5
phage Bas38 N.D. N.D. -0.6 -0.5 -2.2
phage JK38 N.D. N.D. -1.4 -0.1 -1.7
phage TP7 N.D. N.D. -1.8 +0.0 -1.3
phage Bas45 N.D. N.D. -2.2 +0.3 -1.1
phage Bas10 N.D. N.D. -0.8 -0.2 -1.6
phage EV219 N.D. N.D. -1.1 -0.2 -1.3
phage Bas22 N.D. N.D. -1.4 -0.2 -0.9
phage Bas31 N.D. N.D. -1.0 -0.1 -1.3
phage EV219 N.D. N.D. -1.5 -0.5 -0.3
phage Bas31 N.D. N.D. -0.8 -0.2 -1.1
phage P1vir N.D. N.D. -1.2 +0.2 -0.9
phage Bas27 N.D. N.D. -0.6 -0.2 -0.9
phage Bas21 N.D. N.D. -0.7 -0.2 -0.7
phage Bas05 N.D. N.D. -0.7 -0.2 -0.7
phage Bas48 N.D. N.D. -0.6 -0.1 -0.8
phage Bas05 N.D. N.D. -0.5 -0.1 -0.9
phage Bas22 N.D. N.D. -0.7 -0.3 -0.4
phage Bas21 N.D. N.D. -0.7 -0.5 -0.2
phage JK16 N.D. N.D. -0.7 -0.0 -0.7
phage CEV1 N.D. N.D. -0.7 -0.1 -0.6
phage Bas63 N.D. N.D. -0.5 +0.1 -0.9
phage Bas04 N.D. N.D. -0.5 +0.0 -0.9
no phage control Control_Nissle N.D. N.D. -0.4 +0.3 -1.1
phage Phi92 N.D. N.D. +0.4 +0.0 -1.4
phage RB51 N.D. N.D. -0.6 +0.2 -0.6
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