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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS14030 and ECOLIN_RS14035 overlap by 4 nucleotides
ECOLIN_RS14035 and ECOLIN_RS14040 overlap by 4 nucleotides
ECOLIN_RS14040 and ECOLIN_RS14045 overlap by 26 nucleotides
ECOLIN_RS14045 and ECOLIN_RS14050 are separated by 12 nucleotides
ECOLIN_RS14030: ECOLIN_RS14030 - phosphate acetyltransferase, at 2,815,312 to 2,816,328
_RS14030
ECOLIN_RS14035: ECOLIN_RS14035 - ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT, at 2,816,325 to 2,817,128
_RS14035
ECOLIN_RS14040: ECOLIN_RS14040 - ethanolamine utilization acetate kinase EutQ, at 2,817,125 to 2,817,826
_RS14040
ECOLIN_RS14045: ECOLIN_RS14045 - ethanolamine utilization acetate kinase EutP, at 2,817,801 to 2,818,280
_RS14045
ECOLIN_RS14050: ECOLIN_RS14050 - ethanolamine utilization microcompartment protein EutS, at 2,818,293 to 2,818,628
_RS14050
Group
Condition
ECOLIN
_RS14030
ECOLIN
_RS14035
ECOLIN
_RS14040
ECOLIN
_RS14045
ECOLIN
_RS14050
phage
RB51
N.D.
N.D.
N.D.
-1.3
N.D.
phage
EV219
N.D.
N.D.
N.D.
-0.9
N.D.
phage
Bas05
N.D.
N.D.
N.D.
-0.7
N.D.
phage
Bas10
N.D.
N.D.
N.D.
-0.6
N.D.
phage
Bas31
N.D.
N.D.
N.D.
-0.5
N.D.
phage
K25
N.D.
N.D.
N.D.
-0.5
N.D.
phage
TP7
N.D.
N.D.
N.D.
-0.4
N.D.
phage
Bas38
N.D.
N.D.
N.D.
-0.4
N.D.
phage
Bas21
N.D.
N.D.
N.D.
-0.4
N.D.
phage
Bas22
N.D.
N.D.
N.D.
-0.4
N.D.
carbon source
Casamino-acids
N.D.
N.D.
N.D.
-0.4
N.D.
phage
EV219
N.D.
N.D.
N.D.
-0.4
N.D.
phage
Bas21
N.D.
N.D.
N.D.
-0.3
N.D.
phage
Bas52
N.D.
N.D.
N.D.
-0.3
N.D.
phage
K20
N.D.
N.D.
N.D.
+0.3
N.D.
phage
Bas44
N.D.
N.D.
N.D.
+0.3
N.D.
phage
Bas31
N.D.
N.D.
N.D.
+0.3
N.D.
no phage control
Control_Nissle
N.D.
N.D.
N.D.
+0.4
N.D.
phage
Bas05
N.D.
N.D.
N.D.
+0.4
N.D.
phage
Phi92
N.D.
N.D.
N.D.
+0.4
N.D.
carbon source
Casamino-acids
N.D.
N.D.
N.D.
+0.5
N.D.
phage
JK16
N.D.
N.D.
N.D.
+0.5
N.D.
carbon source
D-Glucose
N.D.
N.D.
N.D.
+0.5
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
+0.5
N.D.
phage
Bas51
N.D.
N.D.
N.D.
+0.6
N.D.
phage
K25
N.D.
N.D.
N.D.
+0.6
N.D.
phage
CEV1
N.D.
N.D.
N.D.
+0.7
N.D.
phage
Bas45
N.D.
N.D.
N.D.
+0.7
N.D.
carbon source
D-Glucose
N.D.
N.D.
N.D.
+0.9
N.D.
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
+0.9
N.D.
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