Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS13485 and ECOLIN_RS13490 are separated by 3 nucleotidesECOLIN_RS13490 and ECOLIN_RS13495 are separated by 34 nucleotidesECOLIN_RS13495 and ECOLIN_RS13500 are separated by 165 nucleotidesECOLIN_RS13500 and ECOLIN_RS13510 are separated by 319 nucleotides ECOLIN_RS13485: ECOLIN_RS13485 - penicillin-insensitive murein endopeptidase, at 2,699,421 to 2,700,245 _RS13485 ECOLIN_RS13490: ECOLIN_RS13490 - chorismate synthase, at 2,700,249 to 2,701,334 _RS13490 ECOLIN_RS13495: ECOLIN_RS13495 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 2,701,369 to 2,702,301 _RS13495 ECOLIN_RS13500: ECOLIN_RS13500 - endonuclease SmrB, at 2,702,467 to 2,703,018 _RS13500 ECOLIN_RS13510: ECOLIN_RS13510 - StfH/YfcO family fimbrial adhesin, at 2,703,338 to 2,704,195 _RS13510
Group Condition ECOLIN_RS13485 ECOLIN_RS13490 ECOLIN_RS13495 ECOLIN_RS13500 ECOLIN_RS13510
carbon source L-Rhamnose -2.6 N.D. +0.5 -0.6 -0.6
phage Bas52 -2.7 N.D. +0.1 +0.7 -1.1
phage Bas22 -1.6 N.D. -0.5 -0.5 +0.1
carbon source D-Glucose -1.4 N.D. -0.1 -0.7 +0.5
phage EV219 -1.0 N.D. +0.2 -0.7 -0.2
phage Bas22 +0.8 N.D. +0.1 -2.7 +0.2
phage Bas44 +0.3 N.D. -0.2 -1.7 +0.0
phage Bas10 -0.9 N.D. -0.4 +0.7 -0.9
no phage control Control_Nissle -1.6 N.D. -0.5 +0.8 -0.1
phage Bas38 -1.2 N.D. -0.7 +0.8 -0.3
phage Bas38 -1.3 N.D. -0.4 +0.7 -0.3
phage Bas45 -1.4 N.D. -1.0 +0.8 +0.4
carbon source L-Arabinose -1.0 N.D. +0.5 -0.8 +0.3
phage Bas48 -0.7 N.D. -0.7 +0.3 +0.2
phage RB68 +0.3 N.D. -0.4 +0.3 -1.0
phage TP7 -1.2 N.D. -0.8 +1.7 -0.4
phage Bas21 -1.0 N.D. -0.0 +0.7 -0.2
phage K25 -0.9 N.D. -0.3 +0.7 +0.0
phage Bas27 -0.5 N.D. -0.6 +1.0 -0.5
phage Bas10 -1.4 N.D. +0.0 +1.1 -0.1
phage Bas05 -1.4 N.D. -0.3 +1.5 +0.0
phage Bas04 -0.6 N.D. -0.2 +0.8 -0.2
phage Bas31 -0.5 N.D. +0.2 +0.6 -0.4
phage TP7 -0.7 N.D. -0.5 +1.3 -0.1
phage Phi92 -0.9 N.D. +0.0 +1.3 -0.4
phage JK38 -0.8 N.D. -0.2 +1.4 +0.0
phage JK16 -0.8 N.D. +0.2 +1.3 -0.2
phage Bas21 -0.2 N.D. +0.2 +1.6 -1.1
carbon source Casamino-acids +0.6 N.D. -0.3 +0.7 +0.2
phage Phi92 -0.3 N.D. +0.2 +1.1 +0.2
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