Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS13180 and ECOLIN_RS13185 overlap by 4 nucleotidesECOLIN_RS13185 and ECOLIN_RS13190 are separated by 88 nucleotidesECOLIN_RS13190 and ECOLIN_RS13195 are separated by 78 nucleotidesECOLIN_RS13195 and ECOLIN_RS13200 are separated by 54 nucleotides ECOLIN_RS13180: ECOLIN_RS13180 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 2,635,271 to 2,636,029 _RS13180 ECOLIN_RS13185: ECOLIN_RS13185 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase, at 2,636,026 to 2,637,696 _RS13185 ECOLIN_RS13190: ECOLIN_RS13190 - isochorismate synthase MenF, at 2,637,785 to 2,639,080 _RS13190 ECOLIN_RS13195: ECOLIN_RS13195 - stress response protein ElaB, at 2,639,159 to 2,639,464 _RS13195 ECOLIN_RS13200: ECOLIN_RS13200 - GNAT family N-acetyltransferase, at 2,639,519 to 2,639,980 _RS13200
Group Condition ECOLIN_RS13180 ECOLIN_RS13185 ECOLIN_RS13190 ECOLIN_RS13195 ECOLIN_RS13200
phage Bas63 N.D. -1.2 N.D. N.D. N.D.
no phage control Control_Nissle N.D. -1.2 N.D. N.D. N.D.
carbon source L-Arabinose N.D. -0.8 N.D. N.D. N.D.
carbon source D-Glucose N.D. -0.7 N.D. N.D. N.D.
phage Bas52 N.D. -0.7 N.D. N.D. N.D.
phage Bas22 N.D. -0.7 N.D. N.D. N.D.
phage Bas63 N.D. -0.6 N.D. N.D. N.D.
carbon source D-Glucose N.D. -0.5 N.D. N.D. N.D.
carbon source Casamino-acids N.D. -0.5 N.D. N.D. N.D.
phage P1vir N.D. -0.5 N.D. N.D. N.D.
phage RB68 N.D. -0.5 N.D. N.D. N.D.
phage Bas10 N.D. +0.5 N.D. N.D. N.D.
phage EV219 N.D. +0.5 N.D. N.D. N.D.
phage JK16 N.D. +0.5 N.D. N.D. N.D.
phage CEV1 N.D. +0.5 N.D. N.D. N.D.
phage Bas05 N.D. +0.5 N.D. N.D. N.D.
phage Bas21 N.D. +0.5 N.D. N.D. N.D.
phage TP7 N.D. +0.6 N.D. N.D. N.D.
phage Phi92 N.D. +0.6 N.D. N.D. N.D.
phage JK38 N.D. +0.6 N.D. N.D. N.D.
phage Bas38 N.D. +0.7 N.D. N.D. N.D.
phage Bas10 N.D. +0.7 N.D. N.D. N.D.
phage Bas21 N.D. +0.8 N.D. N.D. N.D.
phage Bas31 N.D. +0.8 N.D. N.D. N.D.
phage Bas27 N.D. +0.8 N.D. N.D. N.D.
phage Bas38 N.D. +0.8 N.D. N.D. N.D.
phage TP7 N.D. +0.9 N.D. N.D. N.D.
phage EV219 N.D. +0.9 N.D. N.D. N.D.
phage Bas05 N.D. +0.9 N.D. N.D. N.D.
phage Bas31 N.D. +1.1 N.D. N.D. N.D.
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