Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS13115 and ECOLIN_RS13120 are separated by 38 nucleotidesECOLIN_RS13120 and ECOLIN_RS13125 are separated by 307 nucleotidesECOLIN_RS13125 and ECOLIN_RS13130 are separated by 3 nucleotidesECOLIN_RS13130 and ECOLIN_RS13135 overlap by 1 nucleotides ECOLIN_RS13115: ECOLIN_RS13115 - nucleoside triphosphatase NudI, at 2,622,991 to 2,623,416 _RS13115 ECOLIN_RS13120: ECOLIN_RS13120 - lipopolysaccharide core heptose(II)-phosphate phosphatase Ais, at 2,623,455 to 2,624,057 _RS13120 ECOLIN_RS13125: ECOLIN_RS13125 - UDP-4-amino-4-deoxy-L-arabinose aminotransferase, at 2,624,365 to 2,625,504 _RS13125 ECOLIN_RS13130: ECOLIN_RS13130 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 2,625,508 to 2,626,476 _RS13130 ECOLIN_RS13135: ECOLIN_RS13135 - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 2,626,476 to 2,628,458 _RS13135
Group Condition ECOLIN_RS13115 ECOLIN_RS13120 ECOLIN_RS13125 ECOLIN_RS13130 ECOLIN_RS13135
carbon source L-Rhamnose N.D. N.D. -1.0 N.D. N.D.
phage EV219 N.D. N.D. -0.8 N.D. N.D.
phage Bas22 N.D. N.D. -0.8 N.D. N.D.
phage Bas21 N.D. N.D. -0.6 N.D. N.D.
phage K20 N.D. N.D. -0.6 N.D. N.D.
phage Bas10 N.D. N.D. -0.4 N.D. N.D.
phage JK38 N.D. N.D. -0.4 N.D. N.D.
phage CEV1 N.D. N.D. -0.3 N.D. N.D.
phage Bas44 N.D. N.D. -0.2 N.D. N.D.
carbon source Casamino-acids N.D. N.D. -0.2 N.D. N.D.
phage RB51 N.D. N.D. -0.2 N.D. N.D.
phage JK38 N.D. N.D. +0.2 N.D. N.D.
carbon source L-Arabinose N.D. N.D. +0.2 N.D. N.D.
phage Bas04 N.D. N.D. +0.2 N.D. N.D.
phage Bas21 N.D. N.D. +0.2 N.D. N.D.
phage Bas48 N.D. N.D. +0.2 N.D. N.D.
phage Bas68 N.D. N.D. +0.3 N.D. N.D.
phage Bas63 N.D. N.D. +0.3 N.D. N.D.
carbon source Sodium-DL-Lactate N.D. N.D. +0.3 N.D. N.D.
carbon source D-Glucose N.D. N.D. +0.3 N.D. N.D.
phage Bas63 N.D. N.D. +0.4 N.D. N.D.
phage RB68 N.D. N.D. +0.4 N.D. N.D.
phage Bas37 N.D. N.D. +0.4 N.D. N.D.
carbon source L-Rhamnose N.D. N.D. +0.5 N.D. N.D.
no phage control Control_Nissle N.D. N.D. +0.6 N.D. N.D.
phage RB51 N.D. N.D. +0.6 N.D. N.D.
phage Bas52 N.D. N.D. +0.6 N.D. N.D.
phage JK16 N.D. N.D. +0.6 N.D. N.D.
phage Bas31 N.D. N.D. +0.6 N.D. N.D.
phage K25 N.D. N.D. +0.8 N.D. N.D.
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