Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS12845 and ECOLIN_RS12850 overlap by 4 nucleotidesECOLIN_RS12850 and ECOLIN_RS12855 are separated by 41 nucleotidesECOLIN_RS12855 and ECOLIN_RS12860 overlap by 4 nucleotidesECOLIN_RS12860 and ECOLIN_RS12865 are separated by 12 nucleotides ECOLIN_RS12845: ECOLIN_RS12845 - heme exporter protein CcmD, at 2,554,940 to 2,555,149 _RS12845 ECOLIN_RS12850: ECOLIN_RS12850 - heme exporter protein CcmC, at 2,555,146 to 2,555,883 _RS12850 ECOLIN_RS12855: ECOLIN_RS12855 - heme exporter protein CcmB, at 2,555,925 to 2,556,587 _RS12855 ECOLIN_RS12860: ECOLIN_RS12860 - cytochrome c biogenesis heme-transporting ATPase CcmA, at 2,556,584 to 2,557,207 _RS12860 ECOLIN_RS12865: ECOLIN_RS12865 - cytochrome c-type protein NapC, at 2,557,220 to 2,557,822 _RS12865
Group Condition ECOLIN_RS12845 ECOLIN_RS12850 ECOLIN_RS12855 ECOLIN_RS12860 ECOLIN_RS12865
phage CEV1 N.D. -1.1 -1.5 N.D. -0.2
phage Bas22 N.D. -1.2 -1.1 N.D. +0.1
carbon source L-Arabinose N.D. -0.6 -1.1 N.D. -0.1
phage Bas68 N.D. -1.6 -0.2 N.D. +0.1
phage RB68 N.D. -1.2 -0.5 N.D. +0.0
carbon source L-Rhamnose N.D. -1.5 +0.1 N.D. -0.1
phage K20 N.D. -1.7 -0.0 N.D. +0.5
carbon source L-Arabinose N.D. -0.8 -0.4 N.D. +0.0
phage K20 N.D. -1.3 +0.2 N.D. -0.0
carbon source Casamino-acids N.D. -1.2 +0.4 N.D. -0.3
no phage control Control_Nissle N.D. -1.4 +0.0 N.D. +0.3
phage Bas63 N.D. -1.6 +0.4 N.D. +0.2
phage Bas44 N.D. -0.7 -0.3 N.D. +0.1
phage TP7 N.D. -1.0 +0.2 N.D. +0.0
phage Bas10 N.D. -0.9 +0.1 N.D. -0.1
phage Bas52 N.D. -0.9 +0.2 N.D. -0.0
phage Bas37 N.D. -1.1 -0.1 N.D. +0.6
phage Bas44 N.D. -1.1 +0.3 N.D. +0.1
phage RB51 N.D. -1.1 +0.1 N.D. +0.5
phage Bas27 N.D. -0.9 +0.5 N.D. +0.2
phage Bas48 N.D. -0.6 +0.9 N.D. -0.4
carbon source D-Glucose N.D. -0.1 +0.6 N.D. -0.5
phage K25 N.D. -0.7 +0.5 N.D. +0.4
phage Bas22 N.D. -0.8 +0.7 N.D. +0.5
phage JK16 N.D. +0.5 -0.5 N.D. +0.4
phage Bas45 N.D. +0.8 -0.3 N.D. +0.0
phage Bas27 N.D. +0.9 -0.2 N.D. +0.1
phage P1vir N.D. +0.4 +0.7 N.D. +0.1
phage K25 N.D. +0.6 +0.6 N.D. +0.2
phage Bas05 N.D. +0.1 +1.3 N.D. +0.0
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