Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS12820 and ECOLIN_RS12825 are separated by 34 nucleotidesECOLIN_RS12825 and ECOLIN_RS12830 overlap by 4 nucleotidesECOLIN_RS12830 and ECOLIN_RS12835 overlap by 4 nucleotidesECOLIN_RS12835 and ECOLIN_RS12840 overlap by 4 nucleotides ECOLIN_RS12820: ECOLIN_RS12820 - nitrate/nitrite response regulator protein NarP, at 2,550,239 to 2,550,886 _RS12820 ECOLIN_RS12825: ECOLIN_RS12825 - cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH, at 2,550,921 to 2,551,973 _RS12825 ECOLIN_RS12830: ECOLIN_RS12830 - thiol:disulfide interchange protein DsbE, at 2,551,970 to 2,552,527 _RS12830 ECOLIN_RS12835: ECOLIN_RS12835 - cytochrome c-type biogenesis heme lyase CcmF, at 2,552,524 to 2,554,467 _RS12835 ECOLIN_RS12840: ECOLIN_RS12840 - cytochrome c maturation protein CcmE, at 2,554,464 to 2,554,943 _RS12840
Group Condition ECOLIN_RS12820 ECOLIN_RS12825 ECOLIN_RS12830 ECOLIN_RS12835 ECOLIN_RS12840
carbon source L-Rhamnose N.D. -2.5 N.D. N.D. N.D.
phage RB51 N.D. -2.2 N.D. N.D. N.D.
phage JK38 N.D. -1.6 N.D. N.D. N.D.
phage TP7 N.D. -1.5 N.D. N.D. N.D.
phage P1vir N.D. -1.4 N.D. N.D. N.D.
phage RB51 N.D. -1.3 N.D. N.D. N.D.
phage Bas31 N.D. -1.3 N.D. N.D. N.D.
phage Bas27 N.D. -1.2 N.D. N.D. N.D.
carbon source Casamino-acids N.D. -1.1 N.D. N.D. N.D.
phage Bas31 N.D. -1.1 N.D. N.D. N.D.
carbon source L-Rhamnose N.D. -1.1 N.D. N.D. N.D.
phage Bas27 N.D. -0.9 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate N.D. -0.9 N.D. N.D. N.D.
phage Bas38 N.D. -0.8 N.D. N.D. N.D.
carbon source D-Glucose N.D. -0.8 N.D. N.D. N.D.
carbon source L-Arabinose N.D. -0.8 N.D. N.D. N.D.
carbon source Casamino-acids N.D. -0.8 N.D. N.D. N.D.
phage Bas10 N.D. -0.8 N.D. N.D. N.D.
carbon source D-Glucose N.D. -0.6 N.D. N.D. N.D.
phage EV219 N.D. -0.6 N.D. N.D. N.D.
phage Bas44 N.D. -0.6 N.D. N.D. N.D.
phage Bas45 N.D. -0.6 N.D. N.D. N.D.
no phage control Control_Nissle N.D. +0.7 N.D. N.D. N.D.
phage Bas68 N.D. +0.7 N.D. N.D. N.D.
phage Phi92 N.D. +0.7 N.D. N.D. N.D.
phage Bas68 N.D. +0.7 N.D. N.D. N.D.
phage TP7 N.D. +0.8 N.D. N.D. N.D.
phage K20 N.D. +0.9 N.D. N.D. N.D.
phage Bas63 N.D. +0.9 N.D. N.D. N.D.
phage Phi92 N.D. +1.0 N.D. N.D. N.D.
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