Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS12645 and ECOLIN_RS12650 are separated by 267 nucleotidesECOLIN_RS12650 and ECOLIN_RS12655 are separated by 129 nucleotidesECOLIN_RS12655 and ECOLIN_RS12660 are separated by 66 nucleotidesECOLIN_RS12660 and ECOLIN_RS12665 are separated by 93 nucleotides ECOLIN_RS12645: ECOLIN_RS12645 - sugar kinase, at 2,515,449 to 2,516,537 _RS12645 ECOLIN_RS12650: ECOLIN_RS12650 - ribosylpyrimidine nucleosidase, at 2,516,805 to 2,517,746 _RS12650 ECOLIN_RS12655: ECOLIN_RS12655 - transcriptional regulator YeiL, at 2,517,876 to 2,518,574 _RS12655 ECOLIN_RS12660: ECOLIN_RS12660 - NupC/NupG family nucleoside CNT transporter, at 2,518,641 to 2,519,891 _RS12660 ECOLIN_RS12665: ECOLIN_RS12665 - 'pseudouridine-5'-phosphate glycosidase' pseudo=_no_value transl_table=11, at 2,519,985 to 2,520,925 _RS12665
Group Condition ECOLIN_RS12645 ECOLIN_RS12650 ECOLIN_RS12655 ECOLIN_RS12660 ECOLIN_RS12665
carbon source D-Glucose N.D. N.D. N.D. -0.6 N.D.
phage Bas48 N.D. N.D. N.D. -0.3 N.D.
carbon source Casamino-acids N.D. N.D. N.D. -0.3 N.D.
phage RB51 N.D. N.D. N.D. -0.3 N.D.
phage EV219 N.D. N.D. N.D. +0.2 N.D.
phage Bas68 N.D. N.D. N.D. +0.2 N.D.
phage Bas22 N.D. N.D. N.D. +0.3 N.D.
phage Bas10 N.D. N.D. N.D. +0.3 N.D.
carbon source L-Arabinose N.D. N.D. N.D. +0.3 N.D.
phage Bas44 N.D. N.D. N.D. +0.3 N.D.
phage Bas38 N.D. N.D. N.D. +0.3 N.D.
phage Bas37 N.D. N.D. N.D. +0.3 N.D.
phage Bas51 N.D. N.D. N.D. +0.4 N.D.
phage K25 N.D. N.D. N.D. +0.4 N.D.
carbon source Sodium-DL-Lactate N.D. N.D. N.D. +0.4 N.D.
carbon source Casamino-acids N.D. N.D. N.D. +0.4 N.D.
phage Bas31 N.D. N.D. N.D. +0.4 N.D.
phage JK38 N.D. N.D. N.D. +0.4 N.D.
phage RB51 N.D. N.D. N.D. +0.4 N.D.
phage TP7 N.D. N.D. N.D. +0.5 N.D.
carbon source L-Arabinose N.D. N.D. N.D. +0.5 N.D.
phage Bas52 N.D. N.D. N.D. +0.5 N.D.
phage Bas52 N.D. N.D. N.D. +0.6 N.D.
phage P1vir N.D. N.D. N.D. +0.6 N.D.
phage Bas63 N.D. N.D. N.D. +0.6 N.D.
phage Bas22 N.D. N.D. N.D. +0.6 N.D.
no phage control Control_Nissle N.D. N.D. N.D. +0.6 N.D.
carbon source L-Rhamnose N.D. N.D. N.D. +0.8 N.D.
phage Bas44 N.D. N.D. N.D. +0.8 N.D.
carbon source L-Rhamnose N.D. N.D. N.D. +1.3 N.D.
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