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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS12625 and ECOLIN_RS12630 are separated by 204 nucleotides
ECOLIN_RS12630 and ECOLIN_RS12635 are separated by 98 nucleotides
ECOLIN_RS12635 and ECOLIN_RS12640 are separated by 73 nucleotides
ECOLIN_RS12640 and ECOLIN_RS12645 are separated by 3 nucleotides
ECOLIN_RS12625: ECOLIN_RS12625 - lysine-specific permease, at 2,510,811 to 2,512,280
_RS12625
ECOLIN_RS12630: ECOLIN_RS12630 - DNA-binding transcriptional regulator YeiE, at 2,512,485 to 2,513,366
_RS12630
ECOLIN_RS12635: ECOLIN_RS12635 - YeiH family protein, at 2,513,465 to 2,514,514
_RS12635
ECOLIN_RS12640: ECOLIN_RS12640 - deoxyribonuclease IV, at 2,514,588 to 2,515,445
_RS12640
ECOLIN_RS12645: ECOLIN_RS12645 - sugar kinase, at 2,515,449 to 2,516,537
_RS12645
Group
Condition
ECOLIN
_RS12625
ECOLIN
_RS12630
ECOLIN
_RS12635
ECOLIN
_RS12640
ECOLIN
_RS12645
phage
Bas52
-0.1
-0.4
-0.9
-0.4
N.D.
phage
P1vir
-0.1
-1.0
-0.1
-0.4
N.D.
phage
JK16
-0.2
-0.7
-0.5
-0.2
N.D.
phage
CEV1
-0.4
-0.4
-0.8
+0.2
N.D.
phage
Bas05
-0.0
-0.6
-0.5
-0.2
N.D.
phage
Bas22
-0.0
+0.0
-0.0
-1.3
N.D.
phage
Bas68
+0.0
-0.4
+0.1
-0.9
N.D.
phage
Bas48
-0.0
-0.4
-0.3
-0.5
N.D.
phage
Bas04
-0.1
-0.8
-0.1
-0.1
N.D.
phage
K20
-0.1
+0.0
-0.2
-0.9
N.D.
phage
JK16
-0.2
-0.6
+0.2
-0.4
N.D.
phage
Bas38
-0.9
+0.4
-0.4
+0.4
N.D.
carbon source
Casamino-acids
-0.0
-0.9
+0.2
+0.2
N.D.
carbon source
L-Arabinose
-0.2
-0.5
+0.5
-0.4
N.D.
phage
Bas38
-0.8
+0.2
-0.1
+0.3
N.D.
phage
EV219
-0.5
-0.1
-0.4
+0.6
N.D.
phage
K25
-0.2
+0.5
-0.4
-0.1
N.D.
phage
K20
+0.1
-0.6
+0.3
+0.1
N.D.
phage
Bas63
-0.1
+0.2
+0.4
-0.6
N.D.
phage
Bas21
-0.3
-0.1
-0.4
+0.8
N.D.
phage
EV219
-0.2
-0.0
-0.4
+0.9
N.D.
phage
Phi92
+0.1
-0.1
-0.5
+0.8
N.D.
carbon source
L-Rhamnose
-0.5
-0.5
+0.4
+1.0
N.D.
phage
Bas37
-0.0
-0.1
-0.4
+1.1
N.D.
phage
Bas37
+0.1
-0.0
-0.3
+0.8
N.D.
phage
Bas21
-0.2
+0.1
-0.1
+0.9
N.D.
phage
Bas48
-0.1
+0.6
+0.3
-0.2
N.D.
phage
Bas45
+0.7
+0.4
+0.2
-0.6
N.D.
phage
Bas27
-0.2
+0.4
-0.0
+0.7
N.D.
carbon source
L-Rhamnose
+0.2
+0.5
+0.9
+0.5
N.D.
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