Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS12260 and ECOLIN_RS12265 are separated by 414 nucleotidesECOLIN_RS12265 and ECOLIN_RS12270 are separated by 81 nucleotidesECOLIN_RS12270 and ECOLIN_RS12275 are separated by 105 nucleotidesECOLIN_RS12275 and ECOLIN_RS12280 are separated by 47 nucleotides ECOLIN_RS12260: ECOLIN_RS12260 - protein YegR, at 2,432,461 to 2,432,778 _RS12260 ECOLIN_RS12265: ECOLIN_RS12265 - lipid kinase YegS, at 2,433,193 to 2,434,092 _RS12265 ECOLIN_RS12270: ECOLIN_RS12270 - DeoR/GlpR family DNA-binding transcription regulator, at 2,434,174 to 2,434,947 _RS12270 ECOLIN_RS12275: ECOLIN_RS12275 - galactitol-1-phosphate 5-dehydrogenase, at 2,435,053 to 2,436,093 _RS12275 ECOLIN_RS12280: ECOLIN_RS12280 - PTS galactitol transporter subunit IIC, at 2,436,141 to 2,437,496 _RS12280
Group Condition ECOLIN_RS12260 ECOLIN_RS12265 ECOLIN_RS12270 ECOLIN_RS12275 ECOLIN_RS12280
carbon source L-Rhamnose N.D. -3.8 N.D. +0.2 -0.3
carbon source L-Rhamnose N.D. -2.3 N.D. -0.8 -0.8
phage Bas27 N.D. -1.9 N.D. -0.0 -1.0
phage Bas10 N.D. -2.1 N.D. -0.7 +0.0
phage CEV1 N.D. -1.4 N.D. -0.2 -0.3
phage JK38 N.D. -0.7 N.D. -0.5 -0.7
carbon source D-Glucose N.D. -0.4 N.D. -0.5 -0.8
phage EV219 N.D. -1.2 N.D. -0.1 -0.2
phage Bas52 N.D. -0.9 N.D. -0.3 -0.2
phage Phi92 N.D. -1.6 N.D. -0.0 +0.1
phage Bas05 N.D. -1.1 N.D. -0.0 -0.3
carbon source Sodium-DL-Lactate N.D. -0.7 N.D. -0.3 -0.3
phage EV219 N.D. -0.7 N.D. -0.8 +0.1
carbon source L-Arabinose N.D. -0.3 N.D. -0.6 -0.4
phage Bas22 N.D. -1.2 N.D. +0.0 +0.2
phage Bas38 N.D. -1.0 N.D. -0.1 +0.4
no phage control Control_Nissle N.D. -2.2 N.D. +1.5 -0.0
phage Bas22 N.D. -0.8 N.D. +0.7 -0.3
phage Bas27 N.D. -0.6 N.D. -0.4 +0.6
phage RB68 N.D. -0.8 N.D. -0.0 +0.4
phage Bas38 N.D. -0.7 N.D. -0.1 +0.5
phage Bas31 N.D. -0.8 N.D. +0.3 +0.2
phage P1vir N.D. +0.9 N.D. +0.1 -1.2
carbon source L-Arabinose N.D. -0.4 N.D. -0.1 +0.7
carbon source D-Glucose N.D. +1.0 N.D. +0.2 -0.8
phage Bas21 N.D. +0.2 N.D. -0.3 +0.8
no phage control Control_Nissle N.D. +0.2 N.D. +1.2 -0.6
phage Bas44 N.D. +0.3 N.D. +0.9 +0.1
phage K25 N.D. +1.0 N.D. +0.5 +0.0
phage K20 N.D. -0.1 N.D. +1.4 +0.6
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