Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS12105 and ECOLIN_RS12110 are separated by 10 nucleotidesECOLIN_RS12110 and ECOLIN_RS12115 overlap by 26 nucleotidesECOLIN_RS12115 and ECOLIN_RS12120 overlap by 4 nucleotidesECOLIN_RS12120 and ECOLIN_RS12125 are separated by 2 nucleotides ECOLIN_RS12105: ECOLIN_RS12105 - colanic acid biosynthesis glycosyltransferase WcaE, at 2,389,613 to 2,390,359 _RS12105 ECOLIN_RS12110: ECOLIN_RS12110 - colanic acid polymerase WcaD, at 2,390,370 to 2,391,587 _RS12110 ECOLIN_RS12115: ECOLIN_RS12115 - colanic acid biosynthesis glycosyltransferase WcaC, at 2,391,562 to 2,392,779 _RS12115 ECOLIN_RS12120: ECOLIN_RS12120 - colanic acid biosynthesis acetyltransferase WcaB, at 2,392,776 to 2,393,264 _RS12120 ECOLIN_RS12125: ECOLIN_RS12125 - colanic acid biosynthesis glycosyltransferase WcaA, at 2,393,267 to 2,394,106 _RS12125
Group Condition ECOLIN_RS12105 ECOLIN_RS12110 ECOLIN_RS12115 ECOLIN_RS12120 ECOLIN_RS12125
carbon source L-Rhamnose -4.4 -0.5 -0.3 N.D. N.D.
carbon source L-Rhamnose -1.5 -0.4 -0.4 N.D. N.D.
phage Bas21 -0.7 -0.6 -0.6 N.D. N.D.
carbon source D-Glucose -0.8 -0.7 -0.1 N.D. N.D.
phage Bas04 -0.3 -0.5 -0.7 N.D. N.D.
phage Bas04 -0.8 -0.1 -0.4 N.D. N.D.
phage Bas63 -0.5 +0.1 -0.7 N.D. N.D.
phage Bas05 -0.8 -0.2 -0.1 N.D. N.D.
phage K25 -0.5 -0.3 -0.2 N.D. N.D.
phage Bas27 -0.7 -0.4 +0.2 N.D. N.D.
phage Bas05 +0.0 -0.4 -0.5 N.D. N.D.
phage Phi92 -0.0 -0.4 -0.4 N.D. N.D.
phage Bas31 -0.3 -0.6 +0.1 N.D. N.D.
phage K20 -0.3 -0.1 -0.4 N.D. N.D.
phage JK16 +0.2 -0.4 -0.6 N.D. N.D.
carbon source L-Arabinose -0.4 -0.4 +0.1 N.D. N.D.
phage EV219 -0.6 -0.3 +0.1 N.D. N.D.
carbon source Sodium-DL-Lactate -1.1 +0.2 +0.3 N.D. N.D.
phage TP7 +0.7 +0.1 -0.9 N.D. N.D.
phage Bas48 +0.3 +0.3 -0.6 N.D. N.D.
phage K20 -0.6 +0.2 +0.4 N.D. N.D.
phage Bas45 +0.5 +0.1 -0.5 N.D. N.D.
carbon source D-Glucose -0.3 +0.5 -0.1 N.D. N.D.
no phage control Control_Nissle +0.5 +0.2 -0.2 N.D. N.D.
phage P1vir +0.5 -0.5 +0.5 N.D. N.D.
phage Bas52 +0.6 -0.2 +0.2 N.D. N.D.
phage Bas31 +0.1 -0.2 +0.9 N.D. N.D.
phage Bas48 +0.7 +0.1 -0.0 N.D. N.D.
phage Bas51 +0.6 +0.0 +0.6 N.D. N.D.
phage Bas68 +0.4 +0.4 +0.5 N.D. N.D.
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