Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS11490 and ECOLIN_RS11495 are separated by 161 nucleotidesECOLIN_RS11495 and ECOLIN_RS11505 are separated by 279 nucleotidesECOLIN_RS11505 and ECOLIN_RS11510 are separated by 34 nucleotidesECOLIN_RS11510 and ECOLIN_RS11515 overlap by 8 nucleotides ECOLIN_RS11490: ECOLIN_RS11490 - tRNA-Asn, at 2,238,010 to 2,238,085 _RS11490 ECOLIN_RS11495: ECOLIN_RS11495 - integrase arm-type DNA-binding domain-containing protein, at 2,238,247 to 2,239,518 _RS11495 ECOLIN_RS11505: ECOLIN_RS11505 - colibactin self-protection protein ClbS, at 2,239,798 to 2,240,310 _RS11505 ECOLIN_RS11510: ECOLIN_RS11510 - colibactin biosynthesis thioesterase ClbQ, at 2,240,345 to 2,241,067 _RS11510 ECOLIN_RS11515: ECOLIN_RS11515 - precolibactin peptidase ClbP, at 2,241,060 to 2,242,574 _RS11515
Group Condition ECOLIN_RS11490 ECOLIN_RS11495 ECOLIN_RS11505 ECOLIN_RS11510 ECOLIN_RS11515
carbon source L-Rhamnose N.D. N.D. N.D. N.D. -1.2
phage Bas52 N.D. N.D. N.D. N.D. -1.2
phage K25 N.D. N.D. N.D. N.D. -0.8
phage Bas68 N.D. N.D. N.D. N.D. -0.7
phage Bas68 N.D. N.D. N.D. N.D. -0.6
phage EV219 N.D. N.D. N.D. N.D. -0.6
phage K25 N.D. N.D. N.D. N.D. -0.5
no phage control Control_Nissle N.D. N.D. N.D. N.D. -0.5
carbon source Sodium-DL-Lactate N.D. N.D. N.D. N.D. -0.4
phage Phi92 N.D. N.D. N.D. N.D. -0.4
phage Bas27 N.D. N.D. N.D. N.D. -0.4
phage CEV1 N.D. N.D. N.D. N.D. -0.4
phage K20 N.D. N.D. N.D. N.D. -0.4
phage Bas37 N.D. N.D. N.D. N.D. -0.3
phage Bas52 N.D. N.D. N.D. N.D. -0.3
phage Bas48 N.D. N.D. N.D. N.D. -0.3
phage P1vir N.D. N.D. N.D. N.D. -0.3
carbon source L-Arabinose N.D. N.D. N.D. N.D. -0.3
phage RB51 N.D. N.D. N.D. N.D. -0.3
phage JK38 N.D. N.D. N.D. N.D. +0.3
phage JK38 N.D. N.D. N.D. N.D. +0.3
phage Bas21 N.D. N.D. N.D. N.D. +0.4
phage Bas48 N.D. N.D. N.D. N.D. +0.4
phage RB51 N.D. N.D. N.D. N.D. +0.4
phage Bas44 N.D. N.D. N.D. N.D. +0.4
phage Bas45 N.D. N.D. N.D. N.D. +0.5
phage JK16 N.D. N.D. N.D. N.D. +0.5
phage Bas04 N.D. N.D. N.D. N.D. +0.5
phage K20 N.D. N.D. N.D. N.D. +0.6
phage Bas37 N.D. N.D. N.D. N.D. +0.7
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