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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS10820 and ECOLIN_RS10825 are separated by 14 nucleotides
ECOLIN_RS10825 and ECOLIN_RS10830 are separated by 69 nucleotides
ECOLIN_RS10830 and ECOLIN_RS10835 are separated by 796 nucleotides
ECOLIN_RS10835 and ECOLIN_RS10840 are separated by 78 nucleotides
ECOLIN_RS10820: ECOLIN_RS10820 - arabinose ABC transporter permease AraH, at 2,107,393 to 2,108,379
_RS10820
ECOLIN_RS10825: ECOLIN_RS10825 - arabinose ABC transporter ATP-binding protein AraG, at 2,108,394 to 2,109,908
_RS10825
ECOLIN_RS10830: ECOLIN_RS10830 - arabinose ABC transporter substrate-binding protein AraF, at 2,109,978 to 2,110,967
_RS10830
ECOLIN_RS10835: ECOLIN_RS10835 - non-heme ferritin-like protein, at 2,111,764 to 2,112,267
_RS10835
ECOLIN_RS10840: ECOLIN_RS10840 - DUF2766 family protein YecJ, at 2,112,346 to 2,112,597
_RS10840
Group
Condition
ECOLIN
_RS10820
ECOLIN
_RS10825
ECOLIN
_RS10830
ECOLIN
_RS10835
ECOLIN
_RS10840
no phage control
Control_Nissle
N.D.
-0.6
-0.6
N.D.
N.D.
phage
Bas52
N.D.
-0.3
-0.4
N.D.
N.D.
phage
Bas52
N.D.
-0.0
-0.4
N.D.
N.D.
phage
Bas44
N.D.
-0.6
+0.1
N.D.
N.D.
phage
Bas44
N.D.
-0.5
+0.2
N.D.
N.D.
phage
RB68
N.D.
+0.2
-0.5
N.D.
N.D.
phage
Bas63
N.D.
+0.2
-0.4
N.D.
N.D.
phage
Bas45
N.D.
+0.2
-0.4
N.D.
N.D.
phage
Bas51
N.D.
+0.1
-0.3
N.D.
N.D.
phage
Bas68
N.D.
+0.0
-0.2
N.D.
N.D.
phage
RB51
N.D.
-0.5
+0.3
N.D.
N.D.
phage
RB68
N.D.
-0.1
-0.1
N.D.
N.D.
phage
Bas22
N.D.
+0.2
-0.3
N.D.
N.D.
phage
Bas68
N.D.
-0.3
+0.3
N.D.
N.D.
phage
K20
N.D.
+0.2
-0.1
N.D.
N.D.
phage
RB51
N.D.
-0.0
+0.1
N.D.
N.D.
phage
K25
N.D.
+0.4
-0.3
N.D.
N.D.
phage
P1vir
N.D.
-0.4
+0.5
N.D.
N.D.
phage
K20
N.D.
+0.2
-0.0
N.D.
N.D.
phage
Bas48
N.D.
+0.3
-0.1
N.D.
N.D.
phage
Bas22
N.D.
+0.6
-0.3
N.D.
N.D.
phage
Bas63
N.D.
+0.3
+0.1
N.D.
N.D.
phage
P1vir
N.D.
+0.3
+0.1
N.D.
N.D.
phage
Bas48
N.D.
+0.2
+0.2
N.D.
N.D.
no phage control
Control_Nissle
N.D.
+0.2
+0.6
N.D.
N.D.
phage
K25
N.D.
+0.9
+0.1
N.D.
N.D.
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