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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS10295 and ECOLIN_RS10300 are separated by 133 nucleotides
ECOLIN_RS10300 and ECOLIN_RS10305 are separated by 55 nucleotides
ECOLIN_RS10305 and ECOLIN_RS10310 are separated by 36 nucleotides
ECOLIN_RS10310 and ECOLIN_RS10315 are separated by 234 nucleotides
ECOLIN_RS10295: ECOLIN_RS10295 - DNA damage-inducible protein YebG, at 2,014,447 to 2,014,737
_RS10295
ECOLIN_RS10300: ECOLIN_RS10300 - formate-dependent phosphoribosylglycinamide formyltransferase, at 2,014,871 to 2,016,050
_RS10300
ECOLIN_RS10305: ECOLIN_RS10305 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase, at 2,016,106 to 2,016,747
_RS10305
ECOLIN_RS10310: ECOLIN_RS10310 - phosphogluconate dehydratase, at 2,016,784 to 2,018,595
_RS10310
ECOLIN_RS10315: ECOLIN_RS10315 - glucose-6-phosphate dehydrogenase, at 2,018,830 to 2,020,305
_RS10315
Group
Condition
ECOLIN
_RS10295
ECOLIN
_RS10300
ECOLIN
_RS10305
ECOLIN
_RS10310
ECOLIN
_RS10315
phage
RB51
N.D.
-1.3
N.D.
N.D.
N.D.
phage
P1vir
N.D.
-0.8
N.D.
N.D.
N.D.
phage
RB68
N.D.
-0.7
N.D.
N.D.
N.D.
phage
K25
N.D.
-0.4
N.D.
N.D.
N.D.
phage
P1vir
N.D.
-0.3
N.D.
N.D.
N.D.
phage
Bas44
N.D.
-0.2
N.D.
N.D.
N.D.
phage
K25
N.D.
-0.2
N.D.
N.D.
N.D.
no phage control
Control_Nissle
N.D.
-0.2
N.D.
N.D.
N.D.
phage
RB51
N.D.
-0.2
N.D.
N.D.
N.D.
phage
K20
N.D.
-0.2
N.D.
N.D.
N.D.
phage
RB68
N.D.
-0.2
N.D.
N.D.
N.D.
phage
Bas68
N.D.
-0.1
N.D.
N.D.
N.D.
phage
Bas52
N.D.
-0.1
N.D.
N.D.
N.D.
phage
Bas63
N.D.
-0.1
N.D.
N.D.
N.D.
phage
Bas68
N.D.
-0.0
N.D.
N.D.
N.D.
phage
Bas48
N.D.
-0.0
N.D.
N.D.
N.D.
phage
Bas48
N.D.
-0.0
N.D.
N.D.
N.D.
no phage control
Control_Nissle
N.D.
-0.0
N.D.
N.D.
N.D.
phage
Bas51
N.D.
+0.0
N.D.
N.D.
N.D.
phage
Bas22
N.D.
+0.1
N.D.
N.D.
N.D.
phage
Bas52
N.D.
+0.2
N.D.
N.D.
N.D.
phage
Bas45
N.D.
+0.3
N.D.
N.D.
N.D.
phage
Bas44
N.D.
+0.3
N.D.
N.D.
N.D.
phage
Bas63
N.D.
+0.3
N.D.
N.D.
N.D.
phage
K20
N.D.
+0.3
N.D.
N.D.
N.D.
phage
Bas22
N.D.
+0.3
N.D.
N.D.
N.D.
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