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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS10070 and ECOLIN_RS10075 are separated by 119 nucleotides
ECOLIN_RS10075 and ECOLIN_RS10080 are separated by 73 nucleotides
ECOLIN_RS10080 and ECOLIN_RS10085 are separated by 3 nucleotides
ECOLIN_RS10085 and ECOLIN_RS10090 are separated by 183 nucleotides
ECOLIN_RS10070: ECOLIN_RS10070 - DUF1889 family protein, at 1,978,118 to 1,978,417
_RS10070
ECOLIN_RS10075: ECOLIN_RS10075 - YoaH family protein, at 1,978,537 to 1,978,716
_RS10075
ECOLIN_RS10080: ECOLIN_RS10080 - aminodeoxychorismate synthase component 1, at 1,978,790 to 1,980,151
_RS10080
ECOLIN_RS10085: ECOLIN_RS10085 - CoA pyrophosphatase, at 1,980,155 to 1,980,733
_RS10085
ECOLIN_RS10090: ECOLIN_RS10090 - L-serine ammonia-lyase, at 1,980,917 to 1,982,281
_RS10090
Group
Condition
ECOLIN
_RS10070
ECOLIN
_RS10075
ECOLIN
_RS10080
ECOLIN
_RS10085
ECOLIN
_RS10090
carbon source
D-Glucose
N.D.
N.D.
-1.1
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.9
N.D.
N.D.
carbon source
D-Glucose
N.D.
N.D.
-0.8
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.6
N.D.
N.D.
phage
RB68
N.D.
N.D.
-0.6
N.D.
N.D.
phage
Bas21
N.D.
N.D.
-0.6
N.D.
N.D.
carbon source
Casamino-acids
N.D.
N.D.
-0.5
N.D.
N.D.
phage
Bas38
N.D.
N.D.
-0.5
N.D.
N.D.
phage
JK16
N.D.
N.D.
-0.5
N.D.
N.D.
phage
EV219
N.D.
N.D.
-0.4
N.D.
N.D.
carbon source
L-Arabinose
N.D.
N.D.
-0.4
N.D.
N.D.
carbon source
L-Arabinose
N.D.
N.D.
-0.4
N.D.
N.D.
phage
Phi92
N.D.
N.D.
+0.3
N.D.
N.D.
phage
Bas37
N.D.
N.D.
+0.3
N.D.
N.D.
phage
Bas31
N.D.
N.D.
+0.3
N.D.
N.D.
phage
Bas51
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas44
N.D.
N.D.
+0.4
N.D.
N.D.
phage
TP7
N.D.
N.D.
+0.4
N.D.
N.D.
phage
K25
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas68
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas52
N.D.
N.D.
+0.4
N.D.
N.D.
phage
CEV1
N.D.
N.D.
+0.4
N.D.
N.D.
phage
JK38
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas22
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas48
N.D.
N.D.
+0.5
N.D.
N.D.
phage
JK38
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas48
N.D.
N.D.
+0.6
N.D.
N.D.
phage
CEV1
N.D.
N.D.
+0.7
N.D.
N.D.
phage
Bas05
N.D.
N.D.
+0.7
N.D.
N.D.
phage
Bas22
N.D.
N.D.
+0.7
N.D.
N.D.
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