Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS09395 and ECOLIN_RS09400 overlap by 4 nucleotidesECOLIN_RS09400 and ECOLIN_RS09405 overlap by 26 nucleotidesECOLIN_RS09405 and ECOLIN_RS09410 are separated by 9 nucleotidesECOLIN_RS09410 and ECOLIN_RS09415 are separated by 8 nucleotides ECOLIN_RS09395: ECOLIN_RS09395 - cysteine desulfurase SufS, at 1,847,755 to 1,848,975 _RS09395 ECOLIN_RS09400: ECOLIN_RS09400 - Fe-S cluster assembly protein SufD, at 1,848,972 to 1,850,243 _RS09400 ECOLIN_RS09405: ECOLIN_RS09405 - Fe-S cluster assembly ATPase SufC, at 1,850,218 to 1,850,964 _RS09405 ECOLIN_RS09410: ECOLIN_RS09410 - Fe-S cluster assembly protein SufB, at 1,850,974 to 1,852,461 _RS09410 ECOLIN_RS09415: ECOLIN_RS09415 - Fe-S cluster assembly scaffold SufA, at 1,852,470 to 1,852,838 _RS09415
Group Condition ECOLIN_RS09395 ECOLIN_RS09400 ECOLIN_RS09405 ECOLIN_RS09410 ECOLIN_RS09415
carbon source L-Arabinose N.D. -0.8 N.D. -0.1 N.D.
phage CEV1 N.D. -0.3 N.D. -0.4 N.D.
phage TP7 N.D. -0.3 N.D. -0.3 N.D.
phage Bas38 N.D. -0.1 N.D. -0.4 N.D.
carbon source L-Arabinose N.D. -0.6 N.D. +0.1 N.D.
phage Bas21 N.D. -0.4 N.D. -0.1 N.D.
phage Bas68 N.D. +0.3 N.D. -0.4 N.D.
carbon source Casamino-acids N.D. -0.3 N.D. +0.3 N.D.
phage Bas37 N.D. +0.3 N.D. -0.2 N.D.
carbon source Casamino-acids N.D. -0.2 N.D. +0.3 N.D.
phage Bas21 N.D. -0.2 N.D. +0.3 N.D.
phage RB68 N.D. -0.2 N.D. +0.4 N.D.
phage Bas31 N.D. +0.4 N.D. -0.1 N.D.
phage Bas68 N.D. -0.2 N.D. +0.4 N.D.
carbon source D-Glucose N.D. -0.1 N.D. +0.4 N.D.
phage Bas52 N.D. -0.1 N.D. +0.4 N.D.
phage Bas22 N.D. +0.4 N.D. -0.0 N.D.
carbon source Sodium-DL-Lactate N.D. +0.3 N.D. +0.1 N.D.
phage JK38 N.D. +0.0 N.D. +0.4 N.D.
phage Bas52 N.D. +0.2 N.D. +0.3 N.D.
carbon source Sodium-DL-Lactate N.D. +0.1 N.D. +0.5 N.D.
phage Bas22 N.D. +0.4 N.D. +0.2 N.D.
phage Bas48 N.D. +0.5 N.D. +0.1 N.D.
phage RB51 N.D. +0.4 N.D. +0.3 N.D.
phage K20 N.D. +0.5 N.D. +0.2 N.D.
no phage control Control_Nissle N.D. +0.1 N.D. +0.6 N.D.
phage K20 N.D. +0.3 N.D. +0.5 N.D.
phage Bas44 N.D. +0.6 N.D. +0.3 N.D.
phage Bas48 N.D. +0.4 N.D. +0.6 N.D.
no phage control Control_Nissle N.D. +0.3 N.D. +0.8 N.D.
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