Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS09010 and ECOLIN_RS09015 are separated by 44 nucleotidesECOLIN_RS09015 and ECOLIN_RS09020 are separated by 38 nucleotidesECOLIN_RS09020 and ECOLIN_RS09025 overlap by 4 nucleotidesECOLIN_RS09025 and ECOLIN_RS09030 are separated by 389 nucleotides ECOLIN_RS09010: ECOLIN_RS09010 - YdgA family protein, at 1,778,604 to 1,780,112 _RS09010 ECOLIN_RS09015: ECOLIN_RS09015 - glucuronide uptake porin UidC, at 1,780,157 to 1,781,422 _RS09015 ECOLIN_RS09020: ECOLIN_RS09020 - glucuronide transporter, at 1,781,461 to 1,782,834 _RS09020 ECOLIN_RS09025: ECOLIN_RS09025 - beta-glucuronidase, at 1,782,831 to 1,784,642 _RS09025 ECOLIN_RS09030: ECOLIN_RS09030 - DNA-binding transcriptional regulator UidR, at 1,785,032 to 1,785,622 _RS09030
Group Condition ECOLIN_RS09010 ECOLIN_RS09015 ECOLIN_RS09020 ECOLIN_RS09025 ECOLIN_RS09030
phage TP7 -0.7 N.D. -0.6 N.D. N.D.
phage Phi92 +0.2 N.D. -1.5 N.D. N.D.
phage Bas31 -0.8 N.D. -0.3 N.D. N.D.
no phage control Control_Nissle -0.3 N.D. -0.7 N.D. N.D.
phage Bas45 -1.6 N.D. +0.7 N.D. N.D.
phage Phi92 -0.2 N.D. -0.7 N.D. N.D.
carbon source L-Rhamnose -1.4 N.D. +0.7 N.D. N.D.
phage Bas04 -1.0 N.D. +0.4 N.D. N.D.
phage Bas05 -0.8 N.D. +0.3 N.D. N.D.
phage JK38 -0.8 N.D. +0.4 N.D. N.D.
phage Bas21 -0.7 N.D. +0.4 N.D. N.D.
phage Bas10 -0.5 N.D. +0.3 N.D. N.D.
phage EV219 -0.9 N.D. +0.7 N.D. N.D.
phage Bas68 -0.5 N.D. +0.6 N.D. N.D.
phage Bas44 -1.0 N.D. +1.1 N.D. N.D.
phage EV219 -0.4 N.D. +0.5 N.D. N.D.
phage Bas27 -0.5 N.D. +0.7 N.D. N.D.
phage K20 -0.2 N.D. +0.7 N.D. N.D.
phage Bas44 -0.9 N.D. +1.4 N.D. N.D.
phage RB51 -0.3 N.D. +0.9 N.D. N.D.
phage Bas51 -0.3 N.D. +0.9 N.D. N.D.
phage K25 -0.4 N.D. +1.2 N.D. N.D.
phage Bas22 -0.2 N.D. +1.0 N.D. N.D.
phage Bas48 -0.1 N.D. +1.2 N.D. N.D.
carbon source D-Glucose +0.8 N.D. +0.3 N.D. N.D.
carbon source L-Rhamnose +0.1 N.D. +1.1 N.D. N.D.
phage P1vir +0.4 N.D. +0.8 N.D. N.D.
phage Bas63 +0.0 N.D. +1.4 N.D. N.D.
phage RB51 +0.0 N.D. +1.5 N.D. N.D.
phage K25 +0.1 N.D. +1.8 N.D. N.D.
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