Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS08985 and ECOLIN_RS08990 are separated by 75 nucleotidesECOLIN_RS08990 and ECOLIN_RS08995 overlap by 4 nucleotidesECOLIN_RS08995 and ECOLIN_RS09000 are separated by 142 nucleotidesECOLIN_RS09000 and ECOLIN_RS09005 are separated by 198 nucleotides ECOLIN_RS08985: ECOLIN_RS08985 - two-component system sensor histidine kinase RstB, at 1,771,634 to 1,772,935 _RS08985 ECOLIN_RS08990: ECOLIN_RS08990 - DNA replication terminus site-binding protein, at 1,773,011 to 1,773,940 _RS08990 ECOLIN_RS08995: ECOLIN_RS08995 - class II fumarate hydratase, at 1,773,937 to 1,775,340 _RS08995 ECOLIN_RS09000: ECOLIN_RS09000 - class I fumarate hydratase, at 1,775,483 to 1,777,129 _RS09000 ECOLIN_RS09005: ECOLIN_RS09005 - mannose-6-phosphate isomerase, at 1,777,328 to 1,778,503 _RS09005
Group Condition ECOLIN_RS08985 ECOLIN_RS08990 ECOLIN_RS08995 ECOLIN_RS09000 ECOLIN_RS09005
phage Phi92 -2.5 N.D. N.D. +0.2 N.D.
phage Bas38 -0.8 N.D. N.D. -0.2 N.D.
carbon source Casamino-acids -0.1 N.D. N.D. -0.9 N.D.
phage K25 -1.1 N.D. N.D. +0.1 N.D.
phage JK38 -1.3 N.D. N.D. +0.4 N.D.
phage Bas27 -0.8 N.D. N.D. -0.1 N.D.
phage EV219 -0.9 N.D. N.D. +0.0 N.D.
phage Bas05 -1.1 N.D. N.D. +0.3 N.D.
phage Bas31 -0.8 N.D. N.D. +0.2 N.D.
phage Bas04 -0.8 N.D. N.D. +0.3 N.D.
phage CEV1 -0.9 N.D. N.D. +0.4 N.D.
phage Bas38 -1.0 N.D. N.D. +0.5 N.D.
phage CEV1 -1.0 N.D. N.D. +0.7 N.D.
phage Bas05 -0.7 N.D. N.D. +0.6 N.D.
phage K25 +0.5 N.D. N.D. -0.5 N.D.
phage Bas10 -0.4 N.D. N.D. +0.6 N.D.
phage Bas27 -0.5 N.D. N.D. +0.6 N.D.
phage Bas37 -0.5 N.D. N.D. +0.7 N.D.
phage JK16 -0.4 N.D. N.D. +0.7 N.D.
phage JK16 -0.3 N.D. N.D. +0.6 N.D.
phage Bas21 -0.6 N.D. N.D. +0.9 N.D.
phage Bas44 -0.5 N.D. N.D. +0.8 N.D.
phage TP7 -0.3 N.D. N.D. +0.6 N.D.
carbon source L-Rhamnose -0.1 N.D. N.D. +0.8 N.D.
phage Bas52 +0.5 N.D. N.D. +0.5 N.D.
phage Bas21 +0.1 N.D. N.D. +0.9 N.D.
no phage control Control_Nissle +0.9 N.D. N.D. +0.1 N.D.
phage Bas22 +0.6 N.D. N.D. +0.5 N.D.
phage Bas63 +0.7 N.D. N.D. +0.4 N.D.
phage RB51 +0.5 N.D. N.D. +0.9 N.D.
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