Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS08565 and ECOLIN_RS08575 are separated by 361 nucleotidesECOLIN_RS08575 and ECOLIN_RS08580 are separated by 56 nucleotidesECOLIN_RS08580 and ECOLIN_RS08585 are separated by 37 nucleotidesECOLIN_RS08585 and ECOLIN_RS31420 are separated by 199 nucleotides ECOLIN_RS08565: ECOLIN_RS08565 - glutamate decarboxylase, at 1,684,374 to 1,685,774 _RS08565 ECOLIN_RS08575: ECOLIN_RS08575 - M16 family metallopeptidase, at 1,686,136 to 1,688,919 _RS08575 ECOLIN_RS08580: ECOLIN_RS08580 - TonB-dependent receptor plug domain-containing protein, at 1,688,976 to 1,691,348 _RS08580 ECOLIN_RS08585: ECOLIN_RS08585 - ABC transporter ATP-binding protein/permease, at 1,691,386 to 1,693,071 _RS08585 ECOLIN_RS31420: ECOLIN_RS31420 - hypothetical protein, at 1,693,271 to 1,693,396 _RS31420
Group Condition ECOLIN_RS08565 ECOLIN_RS08575 ECOLIN_RS08580 ECOLIN_RS08585 ECOLIN_RS31420
carbon source L-Rhamnose N.D. -2.5 -0.4 -0.0 N.D.
phage Bas10 N.D. -1.1 -0.5 -1.0 N.D.
phage Bas05 N.D. +0.2 -1.0 -0.9 N.D.
phage Phi92 N.D. -0.7 -0.9 -0.0 N.D.
phage Bas21 N.D. -0.5 -0.2 -0.9 N.D.
phage Bas37 N.D. -0.7 +0.2 -0.8 N.D.
phage Bas04 N.D. +0.2 -0.5 -0.7 N.D.
phage JK16 N.D. +0.6 -0.6 -0.9 N.D.
phage Bas05 N.D. +0.2 -0.5 -0.7 N.D.
phage Bas38 N.D. +0.5 -1.5 +0.2 N.D.
phage Bas48 N.D. -1.4 +0.0 +0.6 N.D.
phage EV219 N.D. +0.3 +0.2 -1.1 N.D.
phage Bas52 N.D. -0.8 -0.3 +0.6 N.D.
phage CEV1 N.D. +0.7 +0.1 -1.2 N.D.
phage Bas48 N.D. -1.1 +0.1 +0.6 N.D.
phage Bas37 N.D. +0.6 -0.5 -0.3 N.D.
carbon source L-Rhamnose N.D. +0.2 +1.2 -1.4 N.D.
phage CEV1 N.D. +0.8 +0.1 -0.8 N.D.
carbon source D-Glucose N.D. -0.3 -0.9 +1.3 N.D.
phage TP7 N.D. +0.6 -0.5 +0.4 N.D.
phage Bas21 N.D. +0.5 -0.7 +0.7 N.D.
phage Bas44 N.D. -0.3 -0.4 +1.3 N.D.
phage K25 N.D. -0.3 +0.6 +0.6 N.D.
carbon source L-Arabinose N.D. +0.3 -0.5 +1.1 N.D.
phage Bas22 N.D. +1.3 -0.4 +0.5 N.D.
phage K25 N.D. +0.5 +0.8 +0.3 N.D.
phage Bas63 N.D. +0.9 +0.2 +0.7 N.D.
phage RB68 N.D. +0.5 +1.1 +0.4 N.D.
no phage control Control_Nissle N.D. +0.5 +0.7 +1.0 N.D.
phage Bas52 N.D. +0.7 +0.4 +1.3 N.D.
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