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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS07165 and ECOLIN_RS07170 are separated by 145 nucleotides
ECOLIN_RS07170 and ECOLIN_RS07175 are separated by 221 nucleotides
ECOLIN_RS07175 and ECOLIN_RS07180 are separated by 162 nucleotides
ECOLIN_RS07180 and ECOLIN_RS07185 are separated by 329 nucleotides
ECOLIN_RS07165: ECOLIN_RS07165 - disulfide bond formation protein DsbB, at 1,395,748 to 1,396,278
_RS07165
ECOLIN_RS07170: ECOLIN_RS07170 - Na(+)/H(+) antiporter NhaB, at 1,396,424 to 1,397,965
_RS07170
ECOLIN_RS07175: ECOLIN_RS07175 - fatty acid metabolism transcriptional regulator FadR, at 1,398,187 to 1,398,906
_RS07175
ECOLIN_RS07180: ECOLIN_RS07180 - SpoVR family protein, at 1,399,069 to 1,400,601
_RS07180
ECOLIN_RS07185: ECOLIN_RS07185 - D-amino acid dehydrogenase, at 1,400,931 to 1,402,229
_RS07185
Group
Condition
ECOLIN
_RS07165
ECOLIN
_RS07170
ECOLIN
_RS07175
ECOLIN
_RS07180
ECOLIN
_RS07185
phage
TP7
-4.2
+0.4
N.D.
-0.2
N.D.
phage
EV219
-3.0
+0.6
N.D.
-1.4
N.D.
phage
Bas22
-1.6
-0.1
N.D.
-2.1
N.D.
phage
JK38
-4.3
+0.4
N.D.
+0.1
N.D.
phage
Phi92
-4.0
+0.1
N.D.
+0.2
N.D.
phage
JK38
-4.3
+0.4
N.D.
+0.3
N.D.
phage
TP7
-4.4
+0.9
N.D.
-0.0
N.D.
phage
Bas37
-4.3
+0.5
N.D.
+0.3
N.D.
carbon source
L-Rhamnose
-0.9
+0.0
N.D.
-2.7
N.D.
phage
EV219
-4.2
+0.7
N.D.
-0.1
N.D.
phage
Bas10
-2.7
+0.1
N.D.
-0.8
N.D.
phage
Bas37
-4.1
+0.2
N.D.
+0.5
N.D.
phage
Bas27
-3.7
+0.1
N.D.
+0.4
N.D.
phage
RB51
-1.6
+0.4
N.D.
-2.0
N.D.
phage
Bas27
-4.0
+0.6
N.D.
+0.2
N.D.
phage
P1vir
-3.1
-0.2
N.D.
+0.1
N.D.
phage
Bas31
-3.8
-0.1
N.D.
+0.9
N.D.
phage
Bas38
-2.0
+0.2
N.D.
-0.9
N.D.
phage
Bas31
-2.8
+0.3
N.D.
-0.1
N.D.
phage
Bas22
-2.3
+0.4
N.D.
-0.5
N.D.
phage
Bas04
-1.9
+0.1
N.D.
-0.6
N.D.
phage
Bas38
-2.6
+0.2
N.D.
-0.0
N.D.
phage
Bas05
-2.0
+0.3
N.D.
-0.6
N.D.
phage
Bas63
-1.6
+0.2
N.D.
-0.9
N.D.
phage
Bas10
-2.1
+0.2
N.D.
-0.2
N.D.
phage
K20
-2.3
+0.2
N.D.
-0.1
N.D.
phage
Bas05
-2.1
-0.2
N.D.
+0.2
N.D.
phage
Phi92
-2.7
+0.4
N.D.
+0.6
N.D.
phage
JK16
-3.2
+0.6
N.D.
+0.8
N.D.
carbon source
D-Glucose
+2.5
+0.3
N.D.
-1.3
N.D.
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