Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS06045 and ECOLIN_RS06050 are separated by 40 nucleotidesECOLIN_RS06050 and ECOLIN_RS06055 are separated by 58 nucleotidesECOLIN_RS06055 and ECOLIN_RS06060 are separated by 120 nucleotidesECOLIN_RS06060 and ECOLIN_RS06065 are separated by 94 nucleotides ECOLIN_RS06045: ECOLIN_RS06045 - curli minor subunit CsgB, at 1,223,650 to 1,224,105 _RS06045 ECOLIN_RS06050: ECOLIN_RS06050 - curli major subunit CsgA, at 1,224,146 to 1,224,604 _RS06050 ECOLIN_RS06055: ECOLIN_RS06055 - curli assembly chaperone CsgC, at 1,224,663 to 1,224,995 _RS06055 ECOLIN_RS06060: ECOLIN_RS06060 - protein YmdA, at 1,225,116 to 1,225,427 _RS06060 ECOLIN_RS06065: ECOLIN_RS06065 - O-acetyl-ADP-ribose deacetylase, at 1,225,522 to 1,226,055 _RS06065
Group Condition ECOLIN_RS06045 ECOLIN_RS06050 ECOLIN_RS06055 ECOLIN_RS06060 ECOLIN_RS06065
carbon source D-Glucose N.D. N.D. N.D. N.D. -1.1
phage RB51 N.D. N.D. N.D. N.D. -0.8
phage RB68 N.D. N.D. N.D. N.D. -0.7
phage Bas51 N.D. N.D. N.D. N.D. -0.6
phage Bas48 N.D. N.D. N.D. N.D. -0.6
phage Bas05 N.D. N.D. N.D. N.D. -0.5
phage Bas10 N.D. N.D. N.D. N.D. -0.5
phage TP7 N.D. N.D. N.D. N.D. -0.4
phage Bas68 N.D. N.D. N.D. N.D. -0.3
carbon source Casamino-acids N.D. N.D. N.D. N.D. -0.3
no phage control Control_Nissle N.D. N.D. N.D. N.D. -0.3
phage Bas21 N.D. N.D. N.D. N.D. +0.3
phage P1vir N.D. N.D. N.D. N.D. +0.3
phage JK38 N.D. N.D. N.D. N.D. +0.3
phage Bas48 N.D. N.D. N.D. N.D. +0.3
phage Bas45 N.D. N.D. N.D. N.D. +0.3
carbon source L-Arabinose N.D. N.D. N.D. N.D. +0.3
phage JK38 N.D. N.D. N.D. N.D. +0.4
phage Bas38 N.D. N.D. N.D. N.D. +0.4
no phage control Control_Nissle N.D. N.D. N.D. N.D. +0.5
phage EV219 N.D. N.D. N.D. N.D. +0.5
carbon source L-Rhamnose N.D. N.D. N.D. N.D. +0.5
phage Bas05 N.D. N.D. N.D. N.D. +0.5
phage Bas22 N.D. N.D. N.D. N.D. +0.5
phage Bas63 N.D. N.D. N.D. N.D. +0.6
phage Bas68 N.D. N.D. N.D. N.D. +0.6
phage Bas52 N.D. N.D. N.D. N.D. +0.6
phage Bas04 N.D. N.D. N.D. N.D. +0.6
phage Bas37 N.D. N.D. N.D. N.D. +0.7
phage Phi92 N.D. N.D. N.D. N.D. +0.8
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