Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS05515 and ECOLIN_RS05520 are separated by 40 nucleotidesECOLIN_RS05520 and ECOLIN_RS05525 are separated by 64 nucleotidesECOLIN_RS05525 and ECOLIN_RS33375 are separated by 515 nucleotidesECOLIN_RS33375 and ECOLIN_RS32715 overlap by 2 nucleotides ECOLIN_RS05515: ECOLIN_RS05515 - beta-ketoacyl synthase chain length factor, at 1,129,150 to 1,129,872 _RS05515 ECOLIN_RS05520: ECOLIN_RS05520 - methyltransferase, at 1,129,913 to 1,130,971 _RS05520 ECOLIN_RS05525: ECOLIN_RS05525 - hypothetical protein, at 1,131,036 to 1,131,425 _RS05525 ECOLIN_RS33375: ECOLIN_RS33375 - ShlB/FhaC/HecB family hemolysin secretion/activation protein, at 1,131,941 to 1,132,120 _RS33375 ECOLIN_RS32715: ECOLIN_RS32715 - hemagglutinin repeat-containing protein, at 1,132,119 to 1,137,481 _RS32715
Group Condition ECOLIN_RS05515 ECOLIN_RS05520 ECOLIN_RS05525 ECOLIN_RS33375 ECOLIN_RS32715
carbon source L-Rhamnose -0.8 N.D. N.D. N.D. -4.1
phage Bas44 -1.2 N.D. N.D. N.D. -1.5
phage Bas04 -2.0 N.D. N.D. N.D. -0.6
phage Bas68 -2.8 N.D. N.D. N.D. +0.4
phage JK16 -2.1 N.D. N.D. N.D. -0.2
carbon source D-Glucose -0.9 N.D. N.D. N.D. -1.3
phage Bas22 -0.9 N.D. N.D. N.D. -1.2
phage Bas27 -0.1 N.D. N.D. N.D. -1.9
phage Bas63 -0.7 N.D. N.D. N.D. -0.8
phage JK16 -1.3 N.D. N.D. N.D. +0.1
phage K25 -1.0 N.D. N.D. N.D. -0.2
phage Bas48 -0.6 N.D. N.D. N.D. -0.5
phage Bas10 -1.0 N.D. N.D. N.D. -0.1
phage RB51 -1.0 N.D. N.D. N.D. -0.0
phage Bas21 +0.5 N.D. N.D. N.D. -1.5
phage Bas52 -1.5 N.D. N.D. N.D. +1.0
carbon source L-Rhamnose +0.5 N.D. N.D. N.D. -1.0
no phage control Control_Nissle -1.0 N.D. N.D. N.D. +0.5
phage EV219 -0.7 N.D. N.D. N.D. +0.4
phage Bas48 -1.0 N.D. N.D. N.D. +0.8
phage RB51 -1.1 N.D. N.D. N.D. +0.9
phage CEV1 +0.5 N.D. N.D. N.D. -0.6
phage Bas37 +1.0 N.D. N.D. N.D. -0.7
phage Bas05 +0.9 N.D. N.D. N.D. -0.5
phage Bas51 -0.2 N.D. N.D. N.D. +0.9
phage Bas44 -0.3 N.D. N.D. N.D. +1.3
phage TP7 +0.8 N.D. N.D. N.D. +0.2
phage Bas21 +1.2 N.D. N.D. N.D. -0.1
phage TP7 +0.9 N.D. N.D. N.D. +0.5
phage Phi92 +0.8 N.D. N.D. N.D. +0.6
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