Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS04880 and ECOLIN_RS04885 overlap by 20 nucleotidesECOLIN_RS04885 and ECOLIN_RS04890 overlap by 1 nucleotidesECOLIN_RS04890 and ECOLIN_RS04895 are separated by 260 nucleotidesECOLIN_RS04895 and ECOLIN_RS04900 are separated by 180 nucleotides ECOLIN_RS04880: ECOLIN_RS04880 - chromosome partition protein MukF, at 997,955 to 999,277 _RS04880 ECOLIN_RS04885: ECOLIN_RS04885 - chromosome partition protein MukE, at 999,258 to 999,962 _RS04885 ECOLIN_RS04890: ECOLIN_RS04890 - chromosome partition protein MukB, at 999,962 to 1,004,422 _RS04890 ECOLIN_RS04895: ECOLIN_RS04895 - L,D-transpeptidase, at 1,004,683 to 1,006,530 _RS04895 ECOLIN_RS04900: ECOLIN_RS04900 - YcbK family protein, at 1,006,711 to 1,007,259 _RS04900
Group Condition ECOLIN_RS04880 ECOLIN_RS04885 ECOLIN_RS04890 ECOLIN_RS04895 ECOLIN_RS04900
carbon source L-Rhamnose N.D. N.D. N.D. -1.6 N.D.
phage Bas63 N.D. N.D. N.D. -1.5 N.D.
phage RB68 N.D. N.D. N.D. -1.3 N.D.
phage Bas48 N.D. N.D. N.D. -0.9 N.D.
phage Bas44 N.D. N.D. N.D. -0.7 N.D.
phage CEV1 N.D. N.D. N.D. -0.7 N.D.
phage Bas22 N.D. N.D. N.D. -0.7 N.D.
phage P1vir N.D. N.D. N.D. -0.6 N.D.
phage Bas22 N.D. N.D. N.D. -0.6 N.D.
phage Bas38 N.D. N.D. N.D. -0.5 N.D.
phage Bas68 N.D. N.D. N.D. -0.5 N.D.
no phage control Control_Nissle N.D. N.D. N.D. -0.4 N.D.
phage Bas10 N.D. N.D. N.D. +0.4 N.D.
phage JK16 N.D. N.D. N.D. +0.5 N.D.
phage TP7 N.D. N.D. N.D. +0.6 N.D.
phage Phi92 N.D. N.D. N.D. +0.6 N.D.
carbon source Sodium-DL-Lactate N.D. N.D. N.D. +0.6 N.D.
phage JK38 N.D. N.D. N.D. +0.6 N.D.
phage JK16 N.D. N.D. N.D. +0.6 N.D.
carbon source Casamino-acids N.D. N.D. N.D. +0.7 N.D.
carbon source L-Rhamnose N.D. N.D. N.D. +0.7 N.D.
carbon source Sodium-DL-Lactate N.D. N.D. N.D. +0.7 N.D.
phage Bas27 N.D. N.D. N.D. +0.7 N.D.
phage EV219 N.D. N.D. N.D. +0.7 N.D.
phage CEV1 N.D. N.D. N.D. +0.8 N.D.
phage Bas37 N.D. N.D. N.D. +0.8 N.D.
phage Bas04 N.D. N.D. N.D. +0.8 N.D.
phage TP7 N.D. N.D. N.D. +0.8 N.D.
phage Bas21 N.D. N.D. N.D. +1.0 N.D.
phage Bas31 N.D. N.D. N.D. +1.4 N.D.
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