Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS04795 and ECOLIN_RS04800 are separated by 129 nucleotidesECOLIN_RS04800 and ECOLIN_RS04805 are separated by 198 nucleotidesECOLIN_RS04805 and ECOLIN_RS04810 are separated by 70 nucleotidesECOLIN_RS04810 and ECOLIN_RS04815 are separated by 169 nucleotides ECOLIN_RS04795: ECOLIN_RS04795 - 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO, at 978,508 to 980,268 _RS04795 ECOLIN_RS04800: ECOLIN_RS04800 - DUF421 domain-containing protein, at 980,398 to 981,090 _RS04800 ECOLIN_RS04805: ECOLIN_RS04805 - 3-phosphoserine/phosphohydroxythreonine transaminase, at 981,289 to 982,377 _RS04805 ECOLIN_RS04810: ECOLIN_RS04810 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 982,448 to 983,731 _RS04810 ECOLIN_RS04815: ECOLIN_RS04815 - metallopeptidase YcaL, at 983,901 to 984,665 _RS04815
Group Condition ECOLIN_RS04795 ECOLIN_RS04800 ECOLIN_RS04805 ECOLIN_RS04810 ECOLIN_RS04815
carbon source D-Glucose -0.9 N.D. -8.8 -3.6 -0.1
carbon source D-Glucose -0.6 N.D. -5.6 -4.4 -0.1
carbon source Sodium-DL-Lactate -0.6 N.D. -7.8 -2.4 +0.4
carbon source L-Arabinose -0.5 N.D. -7.2 -1.5 -0.3
carbon source L-Arabinose -0.3 N.D. -4.3 -3.9 -0.3
carbon source Sodium-DL-Lactate -1.0 N.D. -5.6 -2.1 +0.2
carbon source Casamino-acids +0.1 N.D. -5.2 -1.1 -0.5
carbon source Casamino-acids +0.1 N.D. -4.1 +0.3 -0.2
carbon source L-Rhamnose +0.2 N.D. -1.3 -1.4 +0.1
carbon source L-Rhamnose -1.2 N.D. +0.2 -1.0 -0.4
phage JK38 -0.6 N.D. -0.6 -1.1 +0.2
phage Bas10 -1.0 N.D. -1.0 +0.3 -0.2
phage RB68 +1.3 N.D. -0.6 -1.0 -0.5
phage Bas31 +0.8 N.D. -0.4 -0.4 -0.6
phage Bas31 +0.7 N.D. -0.5 -0.7 +0.3
phage JK16 +1.1 N.D. -0.3 -0.5 -0.4
phage Bas44 +0.6 N.D. -0.9 +0.3 +0.3
phage Bas52 +1.6 N.D. -0.3 -1.0 +0.1
phage Bas05 +1.3 N.D. -0.1 -0.0 -0.8
phage Bas04 +1.4 N.D. -0.4 +0.0 -0.5
phage K20 +1.3 N.D. -0.6 -0.2 -0.0
phage Bas22 +1.3 N.D. -0.2 -0.5 +0.4
no phage control Control_Nissle +1.6 N.D. -0.4 +0.4 -0.4
phage Bas45 +1.0 N.D. +0.8 -0.7 +0.2
phage Bas21 +0.7 N.D. +1.5 -0.9 +0.1
phage Bas68 +1.4 N.D. +0.2 -0.3 +0.5
phage Bas63 +1.7 N.D. -0.2 +0.5 +0.4
phage Bas21 +1.9 N.D. +1.5 -0.7 +0.0
phage Bas22 +2.2 N.D. +0.5 +0.1 +0.1
no phage control Control_Nissle +1.9 N.D. -0.1 +1.0 +0.1
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