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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS04500 and ECOLIN_RS04505 are separated by 169 nucleotides
ECOLIN_RS04505 and ECOLIN_RS04510 are separated by 171 nucleotides
ECOLIN_RS04510 and ECOLIN_RS04515 are separated by 269 nucleotides
ECOLIN_RS04515 and ECOLIN_RS04520 are separated by 29 nucleotides
ECOLIN_RS04500: ECOLIN_RS04500 - transporter, at 914,167 to 914,505
_RS04500
ECOLIN_RS04505: ECOLIN_RS04505 - transporter, at 914,675 to 915,013
_RS04505
ECOLIN_RS04510: ECOLIN_RS04510 - aspartate:alanine antiporter, at 915,185 to 916,870
_RS04510
ECOLIN_RS04515: ECOLIN_RS04515 - inner membrane protein YbjM, at 917,140 to 917,517
_RS04515
ECOLIN_RS04520: ECOLIN_RS04520 - glutaredoxin 1, at 917,547 to 917,804
_RS04520
Group
Condition
ECOLIN
_RS04500
ECOLIN
_RS04505
ECOLIN
_RS04510
ECOLIN
_RS04515
ECOLIN
_RS04520
carbon source
L-Arabinose
N.D.
N.D.
+0.2
N.D.
-1.1
carbon source
L-Rhamnose
N.D.
N.D.
-0.3
N.D.
-0.3
phage
K25
N.D.
N.D.
-0.0
N.D.
-0.6
phage
Bas52
N.D.
N.D.
-0.4
N.D.
-0.1
phage
RB51
N.D.
N.D.
-0.8
N.D.
+0.4
carbon source
D-Glucose
N.D.
N.D.
+0.1
N.D.
-0.3
phage
Bas48
N.D.
N.D.
-0.4
N.D.
+0.3
phage
Bas68
N.D.
N.D.
-0.3
N.D.
+0.2
phage
RB51
N.D.
N.D.
-0.2
N.D.
+0.3
phage
Bas68
N.D.
N.D.
-0.3
N.D.
+0.4
phage
EV219
N.D.
N.D.
+0.5
N.D.
-0.3
phage
CEV1
N.D.
N.D.
+0.5
N.D.
-0.2
phage
Bas21
N.D.
N.D.
+0.0
N.D.
+0.5
phage
EV219
N.D.
N.D.
+0.3
N.D.
+0.2
phage
Bas22
N.D.
N.D.
+0.2
N.D.
+0.3
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.2
N.D.
+0.3
phage
TP7
N.D.
N.D.
+0.6
N.D.
-0.0
phage
Bas10
N.D.
N.D.
-0.0
N.D.
+0.6
phage
Bas22
N.D.
N.D.
+0.4
N.D.
+0.2
phage
Bas37
N.D.
N.D.
+0.2
N.D.
+0.5
phage
JK38
N.D.
N.D.
+0.4
N.D.
+0.4
phage
TP7
N.D.
N.D.
+0.5
N.D.
+0.2
phage
Bas31
N.D.
N.D.
+0.5
N.D.
+0.3
phage
Bas10
N.D.
N.D.
+0.5
N.D.
+0.3
phage
Bas45
N.D.
N.D.
+0.3
N.D.
+0.5
phage
Bas38
N.D.
N.D.
+0.5
N.D.
+0.4
phage
Bas04
N.D.
N.D.
+0.3
N.D.
+0.6
phage
Bas27
N.D.
N.D.
+0.7
N.D.
+0.2
phage
Phi92
N.D.
N.D.
+0.3
N.D.
+0.7
phage
Bas21
N.D.
N.D.
+0.8
N.D.
+0.5
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