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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS04385 and ECOLIN_RS04390 are separated by 130 nucleotides
ECOLIN_RS04390 and ECOLIN_RS04395 are separated by 75 nucleotides
ECOLIN_RS04395 and ECOLIN_RS04400 overlap by 1 nucleotides
ECOLIN_RS04400 and ECOLIN_RS04405 are separated by 203 nucleotides
ECOLIN_RS04385: ECOLIN_RS04385 - glycyl-radical enzyme activating protein, at 888,616 to 889,515
_RS04385
ECOLIN_RS04390: ECOLIN_RS04390 - fructose-6-phosphate aldolase, at 889,646 to 890,308
_RS04390
ECOLIN_RS04395: ECOLIN_RS04395 - molybdopterin-synthase adenylyltransferase MoeB, at 890,384 to 891,133
_RS04395
ECOLIN_RS04400: ECOLIN_RS04400 - molybdopterin molybdotransferase MoeA, at 891,133 to 892,368
_RS04400
ECOLIN_RS04405: ECOLIN_RS04405 - beta-aspartyl-peptidase, at 892,572 to 893,537
_RS04405
Group
Condition
ECOLIN
_RS04385
ECOLIN
_RS04390
ECOLIN
_RS04395
ECOLIN
_RS04400
ECOLIN
_RS04405
phage
Bas48
N.D.
N.D.
-1.0
N.D.
-0.5
phage
Bas38
N.D.
N.D.
-0.6
N.D.
-0.6
phage
JK16
N.D.
N.D.
-0.3
N.D.
-0.9
phage
JK38
N.D.
N.D.
-0.8
N.D.
-0.2
phage
Bas05
N.D.
N.D.
-0.4
N.D.
-0.6
phage
Bas21
N.D.
N.D.
-0.3
N.D.
-0.6
phage
Bas37
N.D.
N.D.
-0.8
N.D.
-0.1
phage
Bas31
N.D.
N.D.
-0.5
N.D.
-0.4
phage
Bas04
N.D.
N.D.
-0.8
N.D.
-0.0
phage
Bas10
N.D.
N.D.
-0.1
N.D.
-0.7
phage
CEV1
N.D.
N.D.
+0.1
N.D.
-0.6
phage
EV219
N.D.
N.D.
-0.6
N.D.
+0.1
phage
Bas68
N.D.
N.D.
-0.6
N.D.
+0.2
phage
Bas10
N.D.
N.D.
+0.3
N.D.
-0.5
phage
Phi92
N.D.
N.D.
+0.4
N.D.
-0.5
phage
Bas45
N.D.
N.D.
-0.4
N.D.
+0.4
phage
K25
N.D.
N.D.
-0.5
N.D.
+0.5
phage
Bas44
N.D.
N.D.
-0.4
N.D.
+0.5
phage
Bas22
N.D.
N.D.
-0.4
N.D.
+0.6
phage
Bas68
N.D.
N.D.
-0.2
N.D.
+0.6
phage
K20
N.D.
N.D.
+0.2
N.D.
+0.4
carbon source
L-Rhamnose
N.D.
N.D.
+0.3
N.D.
+0.4
phage
RB51
N.D.
N.D.
+0.0
N.D.
+0.7
phage
RB68
N.D.
N.D.
+0.1
N.D.
+0.6
phage
Bas63
N.D.
N.D.
+0.2
N.D.
+0.5
carbon source
L-Rhamnose
N.D.
N.D.
+1.1
N.D.
-0.4
phage
Bas22
N.D.
N.D.
+0.1
N.D.
+0.7
phage
Bas52
N.D.
N.D.
+0.2
N.D.
+0.7
phage
Bas52
N.D.
N.D.
-0.1
N.D.
+0.9
phage
Bas44
N.D.
N.D.
+0.1
N.D.
+0.8
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