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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS04370 and ECOLIN_RS04375 are separated by 199 nucleotides
ECOLIN_RS04375 and ECOLIN_RS04380 are separated by 145 nucleotides
ECOLIN_RS04380 and ECOLIN_RS04385 are separated by 5 nucleotides
ECOLIN_RS04385 and ECOLIN_RS04390 are separated by 130 nucleotides
ECOLIN_RS04370: ECOLIN_RS04370 - ABC-F family ATPase, at 883,425 to 885,017
_RS04370
ECOLIN_RS04375: ECOLIN_RS04375 - sugar-phosphatase YbiV, at 885,217 to 886,032
_RS04375
ECOLIN_RS04380: ECOLIN_RS04380 - glycyl radical protein, at 886,178 to 888,610
_RS04380
ECOLIN_RS04385: ECOLIN_RS04385 - glycyl-radical enzyme activating protein, at 888,616 to 889,515
_RS04385
ECOLIN_RS04390: ECOLIN_RS04390 - fructose-6-phosphate aldolase, at 889,646 to 890,308
_RS04390
Group
Condition
ECOLIN
_RS04370
ECOLIN
_RS04375
ECOLIN
_RS04380
ECOLIN
_RS04385
ECOLIN
_RS04390
carbon source
D-Glucose
-2.1
-1.5
-0.7
N.D.
N.D.
phage
Bas52
-0.4
-1.7
-0.1
N.D.
N.D.
phage
Bas21
-1.4
-0.8
+0.2
N.D.
N.D.
phage
Bas51
-0.6
-1.0
-0.4
N.D.
N.D.
phage
Bas27
-0.6
-0.3
-0.8
N.D.
N.D.
phage
Bas04
-0.1
-1.1
-0.4
N.D.
N.D.
phage
TP7
-0.7
-0.7
-0.2
N.D.
N.D.
carbon source
L-Rhamnose
-2.3
+0.8
-0.0
N.D.
N.D.
phage
Bas68
-0.0
-0.7
-0.7
N.D.
N.D.
phage
K25
-0.6
-0.6
-0.2
N.D.
N.D.
phage
Bas63
+0.2
-1.3
-0.3
N.D.
N.D.
phage
RB68
+0.2
-1.5
+0.1
N.D.
N.D.
phage
Bas44
-0.3
-0.7
-0.3
N.D.
N.D.
phage
Bas44
-0.7
-0.4
-0.1
N.D.
N.D.
phage
Bas05
-0.3
-0.9
-0.0
N.D.
N.D.
phage
JK16
+0.1
-1.1
-0.1
N.D.
N.D.
phage
K25
-0.3
-0.8
+0.1
N.D.
N.D.
phage
Bas68
-0.0
+0.1
-1.0
N.D.
N.D.
phage
CEV1
+0.4
-1.1
-0.1
N.D.
N.D.
phage
JK16
+0.6
-1.0
-0.4
N.D.
N.D.
phage
Bas63
-0.1
-0.8
+0.2
N.D.
N.D.
carbon source
L-Rhamnose
-1.0
+0.8
-0.4
N.D.
N.D.
phage
P1vir
-0.1
+0.4
-0.9
N.D.
N.D.
phage
Bas22
-1.2
+0.3
+0.2
N.D.
N.D.
phage
EV219
+0.5
+0.6
-0.5
N.D.
N.D.
phage
Phi92
+0.6
-0.4
+0.5
N.D.
N.D.
carbon source
D-Glucose
-0.3
+0.2
+0.8
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.4
+0.4
+0.7
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.5
+0.1
+0.7
N.D.
N.D.
carbon source
Casamino-acids
+0.4
+0.2
+0.8
N.D.
N.D.
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