Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS04335 and ECOLIN_RS31285 are separated by 234 nucleotidesECOLIN_RS31285 and ECOLIN_RS04340 are separated by 52 nucleotidesECOLIN_RS04340 and ECOLIN_RS04345 are separated by 49 nucleotidesECOLIN_RS04345 and ECOLIN_RS04350 are separated by 271 nucleotides ECOLIN_RS04335: ECOLIN_RS04335 - threonine/homoserine exporter RhtA, at 876,672 to 877,559 _RS04335 ECOLIN_RS31285: ECOLIN_RS31285 - protein YliM, at 877,794 to 877,859 _RS31285 ECOLIN_RS04340: ECOLIN_RS04340 - outer membrane protein OmpX, at 877,912 to 878,427 _RS04340 ECOLIN_RS04345: ECOLIN_RS04345 - phosphoethanolamine transferase, at 878,477 to 880,060 _RS04345 ECOLIN_RS04350: ECOLIN_RS04350 - manganase accumulation protein MntS, at 880,332 to 880,460 _RS04350
Group Condition ECOLIN_RS04335 ECOLIN_RS31285 ECOLIN_RS04340 ECOLIN_RS04345 ECOLIN_RS04350
phage Bas22 -2.2 N.D. +0.6 N.D. -0.2
phage Bas45 -1.3 N.D. -0.2 N.D. +0.0
phage Bas63 -1.4 N.D. +0.1 N.D. +0.1
phage Phi92 -1.5 N.D. +0.3 N.D. +0.1
phage Bas68 -0.7 N.D. -0.1 N.D. -0.2
phage Bas22 -0.6 N.D. +0.4 N.D. -0.8
phage Bas44 -0.6 N.D. +0.0 N.D. -0.4
no phage control Control_Nissle -1.1 N.D. +0.1 N.D. -0.0
carbon source L-Rhamnose +0.2 N.D. +0.3 N.D. -1.4
phage Bas52 -0.7 N.D. +0.2 N.D. -0.2
phage Bas48 -0.8 N.D. +0.1 N.D. -0.0
phage K20 -1.0 N.D. +0.2 N.D. +0.0
carbon source Casamino-acids -0.8 N.D. -0.1 N.D. +0.3
phage Bas10 -1.3 N.D. +0.5 N.D. +0.2
phage Bas27 -0.5 N.D. +0.4 N.D. -0.5
phage P1vir -1.2 N.D. +0.8 N.D. +0.1
phage Bas48 +0.5 N.D. +0.1 N.D. -0.4
phage EV219 -0.6 N.D. +0.6 N.D. +0.3
phage TP7 +0.7 N.D. -0.5 N.D. +0.4
phage Bas37 +0.9 N.D. -0.2 N.D. -0.1
phage Bas31 -0.0 N.D. +0.9 N.D. -0.2
carbon source L-Rhamnose +1.2 N.D. -0.2 N.D. +0.0
phage Bas10 +0.4 N.D. +0.7 N.D. -0.0
phage K25 +0.8 N.D. +0.2 N.D. +0.1
phage JK16 +0.6 N.D. +0.4 N.D. +0.2
phage Bas04 +0.8 N.D. +0.5 N.D. +0.0
phage EV219 +0.3 N.D. +0.9 N.D. +0.5
phage Bas38 -0.1 N.D. +1.8 N.D. +0.2
phage Bas21 +1.2 N.D. +0.7 N.D. +0.1
phage Bas38 +0.6 N.D. +1.8 N.D. -0.1
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