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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS33355 and ECOLIN_RS03750 are separated by 161 nucleotides
ECOLIN_RS03750 and ECOLIN_RS03755 overlap by 4 nucleotides
ECOLIN_RS03755 and ECOLIN_RS03760 overlap by 8 nucleotides
ECOLIN_RS03760 and ECOLIN_RS03765 are separated by 8 nucleotides
ECOLIN_RS33355: ECOLIN_RS33355 - hypothetical protein, at 766,603 to 766,737
_RS33355
ECOLIN_RS03750: ECOLIN_RS03750 - two-component system response regulator KdpE, at 766,899 to 767,576
_RS03750
ECOLIN_RS03755: ECOLIN_RS03755 - two-component system sensor histidine kinase KdpD, at 767,573 to 770,257
_RS03755
ECOLIN_RS03760: ECOLIN_RS03760 - K(+)-transporting ATPase subunit C, at 770,250 to 770,822
_RS03760
ECOLIN_RS03765: ECOLIN_RS03765 - potassium-transporting ATPase subunit KdpB, at 770,831 to 772,879
_RS03765
Group
Condition
ECOLIN
_RS33355
ECOLIN
_RS03750
ECOLIN
_RS03755
ECOLIN
_RS03760
ECOLIN
_RS03765
phage
RB51
N.D.
N.D.
-1.2
N.D.
N.D.
phage
Bas44
N.D.
N.D.
-1.2
N.D.
N.D.
phage
Bas22
N.D.
N.D.
-1.1
N.D.
N.D.
phage
Bas45
N.D.
N.D.
-0.9
N.D.
N.D.
phage
Bas63
N.D.
N.D.
-0.8
N.D.
N.D.
phage
Bas48
N.D.
N.D.
-0.8
N.D.
N.D.
phage
Bas52
N.D.
N.D.
-0.7
N.D.
N.D.
phage
Bas21
N.D.
N.D.
-0.7
N.D.
N.D.
phage
CEV1
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
L-Rhamnose
N.D.
N.D.
-0.7
N.D.
N.D.
phage
Bas27
N.D.
N.D.
-0.6
N.D.
N.D.
phage
K20
N.D.
N.D.
-0.6
N.D.
N.D.
phage
JK38
N.D.
N.D.
-0.5
N.D.
N.D.
phage
Bas37
N.D.
N.D.
-0.5
N.D.
N.D.
phage
Bas37
N.D.
N.D.
-0.5
N.D.
N.D.
phage
Bas38
N.D.
N.D.
-0.4
N.D.
N.D.
phage
P1vir
N.D.
N.D.
+0.3
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.4
N.D.
N.D.
no phage control
Control_Nissle
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas21
N.D.
N.D.
+0.4
N.D.
N.D.
carbon source
L-Arabinose
N.D.
N.D.
+0.4
N.D.
N.D.
phage
CEV1
N.D.
N.D.
+0.4
N.D.
N.D.
phage
TP7
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas27
N.D.
N.D.
+0.4
N.D.
N.D.
carbon source
Casamino-acids
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas22
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas04
N.D.
N.D.
+0.5
N.D.
N.D.
phage
K25
N.D.
N.D.
+0.5
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.6
N.D.
N.D.
carbon source
D-Glucose
N.D.
N.D.
+0.9
N.D.
N.D.
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