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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS03390 and ECOLIN_RS03395 are separated by 586 nucleotides
ECOLIN_RS03395 and ECOLIN_RS03400 are separated by 174 nucleotides
ECOLIN_RS03400 and ECOLIN_RS03405 are separated by 53 nucleotides
ECOLIN_RS03405 and ECOLIN_RS03410 are separated by 92 nucleotides
ECOLIN_RS03390: ECOLIN_RS03390 - anaerobic C4-dicarboxylate transporter DcuC, at 700,391 to 701,776
_RS03390
ECOLIN_RS03395: ECOLIN_RS03395 - lipid IV(A) palmitoyltransferase PagP, at 702,363 to 702,923
_RS03395
ECOLIN_RS03400: ECOLIN_RS03400 - transcription antiterminator/RNA stability regulator CspE, at 703,098 to 703,307
_RS03400
ECOLIN_RS03405: ECOLIN_RS03405 - fluoride efflux transporter CrcB, at 703,361 to 703,744
_RS03405
ECOLIN_RS03410: ECOLIN_RS03410 - deaminated glutathione amidase, at 703,837 to 704,625
_RS03410
Group
Condition
ECOLIN
_RS03390
ECOLIN
_RS03395
ECOLIN
_RS03400
ECOLIN
_RS03405
ECOLIN
_RS03410
carbon source
L-Rhamnose
N.D.
N.D.
-0.8
N.D.
N.D.
phage
RB68
N.D.
N.D.
-0.7
N.D.
N.D.
phage
Bas44
N.D.
N.D.
-0.4
N.D.
N.D.
phage
RB51
N.D.
N.D.
-0.4
N.D.
N.D.
carbon source
Casamino-acids
N.D.
N.D.
-0.4
N.D.
N.D.
phage
P1vir
N.D.
N.D.
-0.3
N.D.
N.D.
phage
Bas68
N.D.
N.D.
-0.3
N.D.
N.D.
phage
Bas48
N.D.
N.D.
-0.2
N.D.
N.D.
phage
Bas52
N.D.
N.D.
-0.2
N.D.
N.D.
phage
JK16
N.D.
N.D.
+0.3
N.D.
N.D.
carbon source
Casamino-acids
N.D.
N.D.
+0.3
N.D.
N.D.
carbon source
D-Glucose
N.D.
N.D.
+0.3
N.D.
N.D.
phage
CEV1
N.D.
N.D.
+0.3
N.D.
N.D.
phage
Bas10
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas22
N.D.
N.D.
+0.4
N.D.
N.D.
phage
Bas27
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas22
N.D.
N.D.
+0.5
N.D.
N.D.
phage
Bas31
N.D.
N.D.
+0.6
N.D.
N.D.
phage
Bas31
N.D.
N.D.
+0.6
N.D.
N.D.
phage
EV219
N.D.
N.D.
+0.7
N.D.
N.D.
phage
EV219
N.D.
N.D.
+0.8
N.D.
N.D.
phage
JK38
N.D.
N.D.
+0.8
N.D.
N.D.
phage
Bas37
N.D.
N.D.
+0.9
N.D.
N.D.
phage
Bas37
N.D.
N.D.
+0.9
N.D.
N.D.
phage
JK38
N.D.
N.D.
+1.0
N.D.
N.D.
phage
Bas21
N.D.
N.D.
+1.2
N.D.
N.D.
phage
Bas21
N.D.
N.D.
+1.2
N.D.
N.D.
phage
TP7
N.D.
N.D.
+1.3
N.D.
N.D.
phage
Bas45
N.D.
N.D.
+1.4
N.D.
N.D.
phage
TP7
N.D.
N.D.
+1.7
N.D.
N.D.
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