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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS03315 and ECOLIN_RS03320 are separated by 371 nucleotides
ECOLIN_RS03320 and ECOLIN_RS03325 are separated by 170 nucleotides
ECOLIN_RS03325 and ECOLIN_RS03330 are separated by 120 nucleotides
ECOLIN_RS03330 and ECOLIN_RS03335 are separated by 356 nucleotides
ECOLIN_RS03315: ECOLIN_RS03315 - thiol:disulfide interchange protein DsbG, at 685,041 to 685,787
_RS03315
ECOLIN_RS03320: ECOLIN_RS03320 - alkyl hydroperoxide reductase subunit C, at 686,159 to 686,722
_RS03320
ECOLIN_RS03325: ECOLIN_RS03325 - alkyl hydroperoxide reductase subunit F, at 686,893 to 688,458
_RS03325
ECOLIN_RS03330: ECOLIN_RS03330 - universal stress protein UspG, at 688,579 to 689,007
_RS03330
ECOLIN_RS03335: ECOLIN_RS03335 - nucleoside diphosphate kinase regulator, at 689,364 to 689,774
_RS03335
Group
Condition
ECOLIN
_RS03315
ECOLIN
_RS03320
ECOLIN
_RS03325
ECOLIN
_RS03330
ECOLIN
_RS03335
phage
RB51
N.D.
-0.2
-0.7
N.D.
N.D.
phage
Bas45
N.D.
-0.9
+0.0
N.D.
N.D.
phage
Bas05
N.D.
-0.3
-0.4
N.D.
N.D.
carbon source
L-Rhamnose
N.D.
-0.2
-0.4
N.D.
N.D.
carbon source
D-Glucose
N.D.
-0.5
-0.1
N.D.
N.D.
phage
Bas38
N.D.
-0.5
-0.1
N.D.
N.D.
carbon source
L-Arabinose
N.D.
-0.7
+0.0
N.D.
N.D.
phage
CEV1
N.D.
-0.1
-0.5
N.D.
N.D.
carbon source
L-Arabinose
N.D.
-0.8
+0.2
N.D.
N.D.
phage
Bas04
N.D.
-0.1
-0.3
N.D.
N.D.
phage
Bas44
N.D.
-0.1
-0.4
N.D.
N.D.
phage
Bas48
N.D.
-0.3
-0.1
N.D.
N.D.
phage
CEV1
N.D.
-0.4
-0.0
N.D.
N.D.
phage
K20
N.D.
-0.1
-0.3
N.D.
N.D.
phage
Bas68
N.D.
-0.2
-0.1
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.3
+0.1
N.D.
N.D.
phage
Bas27
N.D.
+0.1
-0.3
N.D.
N.D.
phage
Bas52
N.D.
-0.3
+0.2
N.D.
N.D.
phage
Bas22
N.D.
-0.4
+0.3
N.D.
N.D.
phage
Bas63
N.D.
-0.2
+0.2
N.D.
N.D.
carbon source
L-Rhamnose
N.D.
-0.4
+0.5
N.D.
N.D.
carbon source
Sodium-DL-Lactate
N.D.
-0.2
+0.3
N.D.
N.D.
phage
Bas37
N.D.
-0.2
+0.3
N.D.
N.D.
phage
K25
N.D.
-0.3
+0.4
N.D.
N.D.
phage
RB68
N.D.
-0.1
+0.3
N.D.
N.D.
phage
P1vir
N.D.
-0.1
+0.3
N.D.
N.D.
carbon source
Casamino-acids
N.D.
-0.1
+0.4
N.D.
N.D.
phage
TP7
N.D.
+0.4
-0.1
N.D.
N.D.
phage
Bas21
N.D.
+0.2
+0.2
N.D.
N.D.
phage
Bas31
N.D.
+0.3
+0.4
N.D.
N.D.
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