Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS03100 and ECOLIN_RS03105 are separated by 658 nucleotidesECOLIN_RS03105 and ECOLIN_RS03110 are separated by 0 nucleotidesECOLIN_RS03110 and ECOLIN_RS03115 overlap by 14 nucleotidesECOLIN_RS03115 and ECOLIN_RS03120 are separated by 149 nucleotides ECOLIN_RS03100: ECOLIN_RS03100 - omptin family outer membrane protease OmpT, at 634,315 to 635,268 _RS03100 ECOLIN_RS03105: ECOLIN_RS03105 - DUF4434 family protein, at 635,927 to 636,817 _RS03105 ECOLIN_RS03110: ECOLIN_RS03110 - bacteriophage adsorption protein NfrA, at 636,818 to 639,790 _RS03110 ECOLIN_RS03115: ECOLIN_RS03115 - 'cyclic di-3',5'-guanylate-activated glycosyltransferase NrfB' pseudo=_no_value transl_table=11, at 639,777 to 642,014 _RS03115 ECOLIN_RS03120: ECOLIN_RS03120 - Cu(+)/Ag(+) sensor histidine kinase CusS, at 642,164 to 643,606 _RS03120
Group Condition ECOLIN_RS03100 ECOLIN_RS03105 ECOLIN_RS03110 ECOLIN_RS03115 ECOLIN_RS03120
carbon source L-Arabinose N.D. +0.2 +0.2 -1.7 -0.8
carbon source D-Glucose N.D. -0.2 -0.1 -1.1 -0.3
phage CEV1 N.D. -0.5 +0.2 -1.5 +0.4
phage Bas27 N.D. -0.2 +0.3 -1.0 +0.0
carbon source L-Rhamnose N.D. -0.2 +0.7 -1.4 -0.0
carbon source Casamino-acids N.D. +0.1 +0.3 -1.1 -0.1
phage Phi92 N.D. -0.5 +0.4 -1.0 +0.5
carbon source Sodium-DL-Lactate N.D. +0.5 +0.2 -0.4 -0.5
carbon source L-Rhamnose N.D. -0.4 -0.1 +0.9 -0.5
carbon source Sodium-DL-Lactate N.D. +0.3 +0.4 -0.7 -0.1
phage Bas63 N.D. +0.1 -0.7 +0.3 +0.5
phage P1vir N.D. +0.5 -0.4 +0.4 -0.2
phage Bas22 N.D. -0.3 -0.3 +0.8 +0.1
phage Bas22 N.D. +0.4 -0.0 -0.5 +0.4
phage Bas21 N.D. +0.7 +0.4 -0.5 -0.2
phage Bas63 N.D. -0.0 -0.4 +0.6 +0.4
phage TP7 N.D. +0.7 +0.2 -0.4 -0.0
phage Bas68 N.D. +0.4 -0.4 +0.9 -0.0
no phage control Control_Nissle N.D. +0.0 -0.3 +0.4 +0.8
phage Bas52 N.D. +0.5 -0.2 +1.2 -0.5
phage Bas37 N.D. +0.4 +0.5 -0.3 +0.4
phage RB68 N.D. +0.0 -0.4 +1.2 +0.2
phage Bas44 N.D. -0.0 -0.3 +1.2 +0.2
phage TP7 N.D. +0.6 +0.2 -0.0 +0.5
phage Bas37 N.D. +0.5 +0.4 +0.3 +0.1
phage Bas27 N.D. +0.5 +0.3 +0.3 +0.2
carbon source D-Glucose N.D. +0.4 +0.1 +1.1 -0.2
phage RB51 N.D. +0.1 +0.1 +1.0 +0.3
phage Bas21 N.D. +0.3 +0.4 +0.7 +0.3
phage K20 N.D. +0.4 +0.0 +1.2 +0.2
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