Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS02955 and ECOLIN_RS02960 are separated by 12 nucleotidesECOLIN_RS02960 and ECOLIN_RS02965 are separated by 99 nucleotidesECOLIN_RS02965 and ECOLIN_RS02970 are separated by 169 nucleotidesECOLIN_RS02970 and ECOLIN_RS02975 are separated by 59 nucleotides ECOLIN_RS02955: ECOLIN_RS02955 - glyoxylate carboligase, at 607,932 to 609,713 _RS02955 ECOLIN_RS02960: ECOLIN_RS02960 - hydroxypyruvate isomerase, at 609,726 to 610,502 _RS02960 ECOLIN_RS02965: ECOLIN_RS02965 - 2-hydroxy-3-oxopropionate reductase, at 610,602 to 611,480 _RS02965 ECOLIN_RS02970: ECOLIN_RS02970 - putative allantoin permease, at 611,650 to 613,104 _RS02970 ECOLIN_RS02975: ECOLIN_RS02975 - allantoinase AllB, at 613,164 to 614,525 _RS02975
Group Condition ECOLIN_RS02955 ECOLIN_RS02960 ECOLIN_RS02965 ECOLIN_RS02970 ECOLIN_RS02975
carbon source L-Rhamnose +0.2 -0.3 -2.3 +0.4 -0.2
phage TP7 +0.2 -0.3 -0.6 -1.3 +0.1
phage Bas48 +0.0 -0.5 -0.3 -0.5 -0.4
phage Bas45 +0.4 -0.9 -0.2 -0.2 -0.7
phage CEV1 +0.0 +0.3 -1.0 -0.4 -0.3
phage K20 +0.1 -1.1 -0.2 +0.3 -0.1
phage K25 -0.1 -0.3 +0.3 -0.8 -0.1
phage Bas68 +0.1 -1.2 -0.1 +0.4 -0.2
phage Bas48 +0.1 -1.3 +0.2 -0.2 +0.2
phage Bas27 +0.2 -0.5 -0.6 +0.3 -0.2
phage Bas37 +0.2 -0.7 -0.0 -0.5 +0.2
no phage control Control_Nissle +0.2 -0.6 +0.3 -0.5 -0.1
phage Bas63 +0.3 -0.4 +0.3 -0.4 -0.2
phage Bas63 +0.2 -1.2 +0.4 +0.5 -0.1
phage K25 +0.4 -0.6 +0.8 -0.4 +0.0
phage Bas05 +0.5 +0.5 -0.6 +0.1 -0.2
phage JK16 +0.2 -0.3 +0.9 -0.5 -0.1
phage JK38 +0.4 +0.2 +0.2 -0.6 +0.3
carbon source Sodium-DL-Lactate -0.3 +0.4 +0.9 -0.4 -0.1
phage Bas04 +0.1 +0.7 +0.5 -0.5 -0.2
phage Bas21 +0.6 -0.0 +0.5 +0.1 -0.4
phage TP7 +0.6 +0.2 +0.7 -0.6 +0.0
carbon source D-Glucose +0.0 +0.8 +0.7 -0.3 -0.3
no phage control Control_Nissle +0.0 -0.7 +1.1 +0.7 +0.3
phage Bas22 +0.4 -0.3 +1.2 +0.1 -0.1
carbon source L-Rhamnose -0.1 +0.8 +0.4 +0.0 +0.4
phage Phi92 +0.4 +0.4 +0.2 +0.2 +0.5
carbon source D-Glucose +0.1 +1.4 +1.1 -0.6 -0.3
carbon source L-Arabinose +0.2 +0.6 +1.1 +0.2 -0.2
phage Bas22 -0.0 +0.2 +1.2 +0.7 +0.1
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