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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 26 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS02635 and ECOLIN_RS02640 are separated by 190 nucleotides
ECOLIN_RS02640 and ECOLIN_RS02645 are separated by 191 nucleotides
ECOLIN_RS02645 and ECOLIN_RS02650 are separated by 150 nucleotides
ECOLIN_RS02650 and ECOLIN_RS02655 are separated by 105 nucleotides
ECOLIN_RS02635: ECOLIN_RS02635 - endopeptidase La, at 538,193 to 540,547
_RS02635
ECOLIN_RS02640: ECOLIN_RS02640 - nucleoid-associated protein HU-beta, at 540,738 to 541,028
_RS02640
ECOLIN_RS02645: ECOLIN_RS02645 - peptidylprolyl isomerase, at 541,220 to 543,091
_RS02645
ECOLIN_RS02650: ECOLIN_RS02650 - helix-hairpin-helix domain-containing protein, at 543,242 to 543,613
_RS02650
ECOLIN_RS02655: ECOLIN_RS02655 - long-chain acyl-CoA thioesterase FadM, at 543,719 to 544,117
_RS02655
Group
Condition
ECOLIN
_RS02635
ECOLIN
_RS02640
ECOLIN
_RS02645
ECOLIN
_RS02650
ECOLIN
_RS02655
phage
P1vir
-4.9
+0.1
-0.1
+0.3
-0.2
phage
P1vir
-5.2
+0.4
+0.7
-0.2
+0.1
phage
Bas45
-5.4
+0.7
+0.1
-0.1
+0.7
phage
Bas22
-2.8
-0.5
+0.4
-0.3
+0.2
phage
Bas44
-1.5
-0.4
+0.4
-0.6
+0.5
phage
Bas22
-1.7
-0.3
-0.2
+0.0
+0.6
phage
Bas48
-0.8
-0.2
+0.3
-0.7
-0.0
phage
Bas44
-1.3
-0.2
+0.7
-0.1
+0.0
phage
RB68
+0.7
-0.6
-1.2
+0.2
+0.3
phage
Bas48
-0.7
-0.2
+0.5
-0.8
+0.6
phage
Bas52
-0.4
-0.5
-0.0
+0.0
+0.4
phage
RB51
-0.3
-0.1
-0.0
-0.3
+0.4
phage
Bas63
-0.1
-0.1
-0.7
+0.0
+0.6
phage
Bas63
+0.4
-1.0
+0.8
-0.6
+0.1
phage
Bas68
-0.1
+0.1
-0.3
-0.2
+0.2
phage
K20
+0.0
-0.4
+0.1
+0.3
-0.1
phage
Bas51
-0.1
+0.1
-0.2
-0.2
+0.4
phage
RB51
-0.2
+0.2
-0.0
-0.1
+0.3
no phage control
Control_Nissle
+0.3
-0.0
+0.3
-0.4
+0.1
phage
K20
+0.4
+0.1
+0.2
-0.3
+0.1
no phage control
Control_Nissle
+0.5
-0.3
+0.5
-0.4
+0.3
phage
K25
+0.2
-0.3
+0.2
+0.2
+0.4
phage
Bas52
+0.5
-0.3
+0.3
-0.4
+0.6
phage
RB68
+0.6
-0.2
+0.5
-0.1
+0.2
phage
K25
+0.6
+0.2
+0.8
+0.0
+0.1
phage
Bas68
+0.6
+0.2
+0.4
+0.1
+0.5
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ECOLIN_RS02645
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