Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS02420 and ECOLIN_RS02425 are separated by 75 nucleotidesECOLIN_RS02425 and ECOLIN_RS02430 are separated by 155 nucleotidesECOLIN_RS02430 and ECOLIN_RS02435 are separated by 4 nucleotidesECOLIN_RS02435 and ECOLIN_RS02440 are separated by 218 nucleotides ECOLIN_RS02420: ECOLIN_RS02420 - branched-chain amino acid transporter carrier protein BrnQ, at 494,405 to 495,724 _RS02420 ECOLIN_RS02425: ECOLIN_RS02425 - proline-specific permease ProY, at 495,800 to 497,173 _RS02425 ECOLIN_RS02430: ECOLIN_RS02430 - maltodextrin glucosidase, at 497,329 to 499,146 _RS02430 ECOLIN_RS02435: ECOLIN_RS02435 - ACP phosphodiesterase, at 499,151 to 499,732 _RS02435 ECOLIN_RS02440: ECOLIN_RS02440 - tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA, at 499,951 to 501,021 _RS02440
Group Condition ECOLIN_RS02420 ECOLIN_RS02425 ECOLIN_RS02430 ECOLIN_RS02435 ECOLIN_RS02440
phage Bas38 -1.0 +0.1 -0.1 -0.3 N.D.
phage CEV1 -0.6 +0.4 +0.2 -0.2 N.D.
phage Bas31 -0.2 +0.5 +0.1 -0.5 N.D.
phage JK16 -0.4 +0.5 -0.4 +0.2 N.D.
phage JK16 -0.4 +0.7 -0.0 -0.3 N.D.
phage JK38 -0.4 +1.0 +0.0 -0.4 N.D.
phage Phi92 -0.4 +0.8 -0.2 -0.0 N.D.
phage Bas22 -0.5 +0.5 +0.3 -0.1 N.D.
phage CEV1 -0.9 +0.5 +0.5 -0.0 N.D.
phage Bas27 -0.2 +0.6 +0.3 -0.5 N.D.
phage Bas63 -0.5 +0.5 +0.3 +0.0 N.D.
phage Bas21 -0.4 +0.7 -0.0 +0.1 N.D.
phage Bas04 -0.2 +0.7 +0.1 -0.2 N.D.
phage RB51 -0.7 +0.5 +0.2 +0.5 N.D.
phage Bas21 -0.6 +0.9 -0.0 +0.3 N.D.
phage Bas68 -0.4 +0.4 +0.2 +0.3 N.D.
phage Bas04 -0.2 +1.0 -0.1 -0.2 N.D.
phage Bas37 +0.0 +0.7 +0.4 -0.6 N.D.
phage Bas37 -0.2 +0.8 +0.2 -0.3 N.D.
phage Bas05 -0.5 +0.9 +0.3 +0.1 N.D.
phage Bas05 -0.2 +0.8 -0.1 +0.4 N.D.
phage Bas31 -0.3 +0.4 +0.5 +0.3 N.D.
phage Bas51 -0.3 +0.6 +0.2 +0.4 N.D.
phage RB68 +0.0 +0.7 -0.5 +0.8 N.D.
phage K20 -0.1 +0.6 +0.2 +0.3 N.D.
phage Bas63 +0.3 +0.3 +0.2 +0.5 N.D.
phage K25 -0.0 +0.8 +0.1 +0.3 N.D.
no phage control Control_Nissle +0.2 +0.9 +0.3 +0.0 N.D.
phage K25 -0.2 +0.6 +0.5 +0.6 N.D.
carbon source L-Rhamnose +0.9 +0.2 +1.1 -0.6 N.D.
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