Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS02410 and ECOLIN_RS02415 are separated by 57 nucleotidesECOLIN_RS02415 and ECOLIN_RS02420 are separated by 406 nucleotidesECOLIN_RS02420 and ECOLIN_RS02425 are separated by 75 nucleotidesECOLIN_RS02425 and ECOLIN_RS02430 are separated by 155 nucleotides ECOLIN_RS02410: ECOLIN_RS02410 - phosphate response regulator transcription factor PhoB, at 491,956 to 492,645 _RS02410 ECOLIN_RS02415: ECOLIN_RS02415 - phosphate regulon sensor histidine kinase PhoR, at 492,703 to 493,998 _RS02415 ECOLIN_RS02420: ECOLIN_RS02420 - branched-chain amino acid transporter carrier protein BrnQ, at 494,405 to 495,724 _RS02420 ECOLIN_RS02425: ECOLIN_RS02425 - proline-specific permease ProY, at 495,800 to 497,173 _RS02425 ECOLIN_RS02430: ECOLIN_RS02430 - maltodextrin glucosidase, at 497,329 to 499,146 _RS02430
Group Condition ECOLIN_RS02410 ECOLIN_RS02415 ECOLIN_RS02420 ECOLIN_RS02425 ECOLIN_RS02430
phage Bas38 +0.1 -0.1 -1.0 +0.1 -0.1
phage JK16 +0.2 -0.2 -0.4 +0.5 -0.4
phage RB51 -0.1 -0.2 -0.7 +0.5 +0.2
carbon source D-Glucose -0.1 -0.3 +0.3 -0.3 +0.3
phage Bas27 +0.2 -0.6 +0.0 +0.5 -0.1
phage CEV1 +0.2 -0.3 -0.6 +0.4 +0.2
phage RB68 -0.3 +0.1 +0.0 +0.7 -0.5
phage Phi92 +0.2 -0.3 -0.4 +0.8 -0.2
carbon source L-Arabinose +0.5 -0.7 +0.0 -0.2 +0.5
phage Bas22 -0.0 -0.2 -0.5 +0.5 +0.3
phage Bas63 -0.2 -0.0 -0.5 +0.5 +0.3
phage Bas21 +0.2 -0.2 -0.4 +0.7 -0.0
phage Bas21 +0.0 +0.1 -0.6 +0.9 -0.0
phage JK16 +0.4 -0.3 -0.4 +0.7 -0.0
phage Bas52 -0.4 +0.0 -0.1 +0.5 +0.3
phage CEV1 +0.2 +0.0 -0.9 +0.5 +0.5
phage EV219 +0.2 -0.0 -0.4 +0.3 +0.3
phage JK38 +0.2 -0.2 -0.4 +1.0 +0.0
phage Bas05 +0.2 -0.1 -0.2 +0.8 -0.1
phage Bas04 -0.0 -0.0 -0.2 +1.0 -0.1
phage Bas04 +0.2 -0.1 -0.2 +0.7 +0.1
phage Bas31 +0.2 +0.0 -0.3 +0.4 +0.5
no phage control Control_Nissle -0.3 +0.1 +0.1 +0.8 +0.1
phage Bas05 +0.3 -0.1 -0.5 +0.9 +0.3
phage Bas37 +0.1 -0.0 -0.2 +0.8 +0.2
phage K25 +0.0 +0.0 -0.2 +0.6 +0.5
phage Bas27 +0.4 -0.0 -0.2 +0.6 +0.3
phage Bas37 +0.2 -0.0 +0.0 +0.7 +0.4
no phage control Control_Nissle +0.1 +0.1 +0.2 +0.9 +0.3
carbon source L-Rhamnose +0.1 -0.1 +0.9 +0.2 +1.1
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