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Protein
Homologs
Fitness for 5 genes in
Escherichia coli Nissle 1917
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECOLIN_RS01985 and ECOLIN_RS01990 are separated by 108 nucleotides
ECOLIN_RS01990 and ECOLIN_RS01995 are separated by 226 nucleotides
ECOLIN_RS01995 and ECOLIN_RS02000 are separated by 525 nucleotides
ECOLIN_RS02000 and ECOLIN_RS02005 are separated by 10 nucleotides
ECOLIN_RS01985: ECOLIN_RS01985 - reactive chlorine resistance periplasmic protein RclB, at 401,300 to 401,536
_RS01985
ECOLIN_RS01990: ECOLIN_RS01990 - reactive chlorine resistance oxidoreductase RclA, at 401,645 to 402,970
_RS01990
ECOLIN_RS01995: ECOLIN_RS01995 - reactive chlorine-specific transcriptional regulator RclR, at 403,197 to 404,051
_RS01995
ECOLIN_RS02000: ECOLIN_RS02000 - (Fe-S)-binding protein, at 404,577 to 405,296
_RS02000
ECOLIN_RS02005: ECOLIN_RS02005 - LutB/LldF family L-lactate oxidation iron-sulfur protein, at 405,307 to 406,734
_RS02005
Group
Condition
ECOLIN
_RS01985
ECOLIN
_RS01990
ECOLIN
_RS01995
ECOLIN
_RS02000
ECOLIN
_RS02005
carbon source
L-Arabinose
N.D.
-0.4
-0.6
-0.1
-0.4
phage
K25
N.D.
-0.9
+0.2
-0.2
-0.5
carbon source
L-Arabinose
N.D.
-0.1
-0.9
-0.0
-0.3
phage
K25
N.D.
-0.2
-0.1
-0.2
-0.8
phage
Bas04
N.D.
-0.4
-0.2
+0.1
-0.7
phage
JK16
N.D.
-0.3
-0.4
-0.0
-0.3
phage
RB51
N.D.
+0.2
-0.7
+0.2
-0.6
carbon source
L-Rhamnose
N.D.
+0.5
-0.7
-0.1
-0.6
phage
RB51
N.D.
-0.7
-0.3
-0.1
+0.2
phage
JK16
N.D.
-0.2
-0.6
+0.6
-0.1
phage
Phi92
N.D.
-0.6
+0.3
-0.0
+0.1
phage
K20
N.D.
-0.4
+0.4
-0.4
+0.2
phage
Bas63
N.D.
-0.3
-0.1
-0.2
+0.5
phage
Bas27
N.D.
+0.3
-0.4
+0.3
-0.3
phage
RB68
N.D.
-0.5
+0.8
+0.0
-0.3
phage
P1vir
N.D.
-0.3
-0.1
-0.1
+0.7
phage
CEV1
N.D.
-0.1
+0.5
+0.3
-0.5
phage
Bas68
N.D.
-0.5
+0.4
+0.1
+0.4
phage
CEV1
N.D.
+0.3
+0.6
+0.1
-0.5
phage
TP7
N.D.
+0.1
+0.1
+0.7
-0.2
phage
Bas21
N.D.
-0.4
+0.8
+0.2
+0.0
phage
TP7
N.D.
+0.2
+0.5
+0.3
-0.4
carbon source
Sodium-DL-Lactate
N.D.
+0.5
-0.3
+0.1
+0.4
carbon source
D-Glucose
N.D.
+0.8
-0.2
+0.1
+0.3
phage
Bas38
N.D.
+0.4
+0.1
+0.5
-0.1
phage
Bas27
N.D.
+0.5
-0.1
+0.2
+0.4
phage
Bas48
N.D.
-0.3
+0.3
+0.3
+0.8
phage
Phi92
N.D.
+0.2
+0.3
+0.2
+0.5
phage
Bas38
N.D.
+0.3
+0.2
+0.4
+0.4
carbon source
L-Rhamnose
N.D.
+0.9
-0.2
+0.7
+0.5
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