Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS01080 and ECOLIN_RS01085 are separated by 117 nucleotidesECOLIN_RS01085 and ECOLIN_RS01090 are separated by 39 nucleotidesECOLIN_RS01090 and ECOLIN_RS01095 overlap by 8 nucleotidesECOLIN_RS01095 and ECOLIN_RS01100 are separated by 187 nucleotides ECOLIN_RS01080: ECOLIN_RS01080 - Rcs stress response system protein RcsF, at 228,622 to 229,026 _RS01080 ECOLIN_RS01085: ECOLIN_RS01085 - methionine ABC transporter substrate-binding lipoprotein MetQ, at 229,144 to 229,959 _RS01085 ECOLIN_RS01090: ECOLIN_RS01090 - methionine ABC transporter permease MetI, at 229,999 to 230,652 _RS01090 ECOLIN_RS01095: ECOLIN_RS01095 - methionine ABC transporter ATP-binding protein MetN, at 230,645 to 231,676 _RS01095 ECOLIN_RS01100: ECOLIN_RS01100 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 231,864 to 232,436 _RS01100
Group Condition ECOLIN_RS01080 ECOLIN_RS01085 ECOLIN_RS01090 ECOLIN_RS01095 ECOLIN_RS01100
phage K20 -1.6 N.D. -0.3 +0.1 N.D.
phage Bas68 -2.3 N.D. +0.0 +0.5 N.D.
phage K20 -0.7 N.D. -0.1 -0.3 N.D.
phage Bas68 -0.9 N.D. +0.1 -0.2 N.D.
carbon source L-Rhamnose -1.1 N.D. +0.2 -0.1 N.D.
phage Bas38 -1.1 N.D. -0.2 +0.4 N.D.
phage Bas44 -0.7 N.D. -0.2 +0.2 N.D.
no phage control Control_Nissle -0.4 N.D. -0.5 +0.2 N.D.
phage Bas38 -0.7 N.D. -0.4 +0.4 N.D.
carbon source L-Arabinose -0.7 N.D. +0.2 -0.0 N.D.
phage Bas51 -0.3 N.D. -0.5 +0.4 N.D.
phage RB68 -0.4 N.D. -0.5 +0.4 N.D.
phage Bas22 -1.0 N.D. +0.3 +0.3 N.D.
phage RB51 -1.1 N.D. -0.1 +0.8 N.D.
carbon source Sodium-DL-Lactate +0.2 N.D. +0.1 -0.5 N.D.
carbon source L-Arabinose +0.5 N.D. -0.3 -0.4 N.D.
phage K25 -0.3 N.D. -0.3 +0.7 N.D.
phage Bas48 -0.6 N.D. -0.0 +0.7 N.D.
phage Bas44 -0.6 N.D. +0.0 +0.7 N.D.
phage K25 -0.1 N.D. -0.2 +0.6 N.D.
phage Bas37 +0.7 N.D. -0.0 -0.3 N.D.
phage Bas21 -0.1 N.D. -0.1 +0.8 N.D.
phage EV219 +0.4 N.D. -0.1 +0.5 N.D.
phage Bas10 +0.4 N.D. +0.5 +0.0 N.D.
phage JK38 +0.2 N.D. +0.3 +0.4 N.D.
phage Bas22 +0.4 N.D. +0.1 +0.7 N.D.
phage TP7 +0.8 N.D. +0.0 +0.4 N.D.
carbon source Casamino-acids +0.7 N.D. +0.4 +0.1 N.D.
phage Bas45 +1.2 N.D. -0.1 +0.2 N.D.
phage TP7 +0.9 N.D. +0.3 +0.8 N.D.
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