Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00995 and ECOLIN_RS01000 are separated by 36 nucleotidesECOLIN_RS01000 and ECOLIN_RS01005 are separated by 12 nucleotidesECOLIN_RS01005 and ECOLIN_RS01010 are separated by 97 nucleotidesECOLIN_RS01010 and ECOLIN_RS01015 are separated by 56 nucleotides ECOLIN_RS00995: ECOLIN_RS00995 - ribonuclease HII, at 212,141 to 212,737 _RS00995 ECOLIN_RS01000: ECOLIN_RS01000 - DNA polymerase III subunit alpha, at 212,774 to 216,256 _RS01000 ECOLIN_RS01005: ECOLIN_RS01005 - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 216,269 to 217,228 _RS01005 ECOLIN_RS01010: ECOLIN_RS01010 - lysine decarboxylase LdcC, at 217,326 to 219,467 _RS01010 ECOLIN_RS01015: ECOLIN_RS01015 - VOC family protein, at 219,524 to 219,913 _RS01015
Group Condition ECOLIN_RS00995 ECOLIN_RS01000 ECOLIN_RS01005 ECOLIN_RS01010 ECOLIN_RS01015
phage Bas45 N.D. N.D. N.D. -1.2 -1.0
carbon source D-Glucose N.D. N.D. N.D. -0.5 -0.8
phage Bas44 N.D. N.D. N.D. -0.9 -0.3
no phage control Control_Nissle N.D. N.D. N.D. -0.1 -1.1
phage Bas44 N.D. N.D. N.D. -0.7 -0.5
carbon source Sodium-DL-Lactate N.D. N.D. N.D. -1.5 +0.4
phage Bas51 N.D. N.D. N.D. +0.2 -1.2
phage Bas68 N.D. N.D. N.D. +0.0 -1.0
phage Bas48 N.D. N.D. N.D. -0.3 -0.5
carbon source Casamino-acids N.D. N.D. N.D. -0.6 -0.3
phage Bas52 N.D. N.D. N.D. -0.5 -0.3
phage Bas27 N.D. N.D. N.D. -0.4 -0.3
phage K20 N.D. N.D. N.D. -0.6 +0.4
no phage control Control_Nissle N.D. N.D. N.D. +0.4 -0.6
phage Bas63 N.D. N.D. N.D. +0.4 -0.5
phage JK16 N.D. N.D. N.D. +0.5 -0.4
phage Bas22 N.D. N.D. N.D. -0.4 +0.5
phage K25 N.D. N.D. N.D. -0.5 +0.8
phage K20 N.D. N.D. N.D. +0.7 -0.1
phage Phi92 N.D. N.D. N.D. +0.9 -0.4
phage Bas37 N.D. N.D. N.D. +0.8 -0.2
phage TP7 N.D. N.D. N.D. +0.5 +0.3
phage Bas27 N.D. N.D. N.D. +0.6 +0.2
phage Bas10 N.D. N.D. N.D. +0.6 +0.3
phage P1vir N.D. N.D. N.D. +0.1 +0.9
phage Bas10 N.D. N.D. N.D. +0.6 +0.4
phage CEV1 N.D. N.D. N.D. +0.9 +0.1
phage Bas21 N.D. N.D. N.D. +0.7 +0.4
phage Bas37 N.D. N.D. N.D. +0.7 +0.4
phage Bas05 N.D. N.D. N.D. +1.0 +0.3
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