Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS31195 and ECOLIN_RS00870 overlap by 8 nucleotidesECOLIN_RS00870 and ECOLIN_RS00875 are separated by 46 nucleotidesECOLIN_RS00875 and ECOLIN_RS00880 are separated by 37 nucleotidesECOLIN_RS00880 and ECOLIN_RS00885 overlap by 8 nucleotides ECOLIN_RS31195: ECOLIN_RS31195 - small protein YadW, at 185,213 to 185,278 _RS31195 ECOLIN_RS00870: ECOLIN_RS00870 - iron-sulfur cluster insertion protein ErpA, at 185,271 to 185,615 _RS00870 ECOLIN_RS00875: ECOLIN_RS00875 - TRIC cation channel family protein, at 185,662 to 186,285 _RS00875 ECOLIN_RS00880: ECOLIN_RS00880 - vitamin B12 ABC transporter substrate-binding protein BtuF, at 186,323 to 187,123 _RS00880 ECOLIN_RS00885: ECOLIN_RS00885 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 187,116 to 187,814 _RS00885
Group Condition ECOLIN_RS31195 ECOLIN_RS00870 ECOLIN_RS00875 ECOLIN_RS00880 ECOLIN_RS00885
phage Bas27 N.D. N.D. -0.9 N.D. N.D.
phage P1vir N.D. N.D. -0.8 N.D. N.D.
phage Bas04 N.D. N.D. -0.5 N.D. N.D.
phage Bas68 N.D. N.D. -0.5 N.D. N.D.
phage CEV1 N.D. N.D. -0.5 N.D. N.D.
no phage control Control_Nissle N.D. N.D. -0.3 N.D. N.D.
phage Bas51 N.D. N.D. -0.3 N.D. N.D.
phage EV219 N.D. N.D. -0.3 N.D. N.D.
phage RB51 N.D. N.D. -0.3 N.D. N.D.
carbon source Sodium-DL-Lactate N.D. N.D. +0.3 N.D. N.D.
phage Bas10 N.D. N.D. +0.3 N.D. N.D.
phage Bas37 N.D. N.D. +0.3 N.D. N.D.
phage Bas37 N.D. N.D. +0.3 N.D. N.D.
carbon source L-Arabinose N.D. N.D. +0.3 N.D. N.D.
phage Bas10 N.D. N.D. +0.3 N.D. N.D.
phage Bas38 N.D. N.D. +0.3 N.D. N.D.
phage Bas05 N.D. N.D. +0.3 N.D. N.D.
carbon source Sodium-DL-Lactate N.D. N.D. +0.3 N.D. N.D.
phage K20 N.D. N.D. +0.3 N.D. N.D.
phage K25 N.D. N.D. +0.4 N.D. N.D.
phage JK16 N.D. N.D. +0.4 N.D. N.D.
phage Bas45 N.D. N.D. +0.4 N.D. N.D.
carbon source Casamino-acids N.D. N.D. +0.4 N.D. N.D.
phage Bas27 N.D. N.D. +0.5 N.D. N.D.
phage Phi92 N.D. N.D. +0.6 N.D. N.D.
carbon source D-Glucose N.D. N.D. +0.6 N.D. N.D.
carbon source D-Glucose N.D. N.D. +0.6 N.D. N.D.
phage Bas04 N.D. N.D. +0.6 N.D. N.D.
phage Bas48 N.D. N.D. +0.6 N.D. N.D.
carbon source L-Arabinose N.D. N.D. +0.8 N.D. N.D.
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