Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00555 and ECOLIN_RS32470 are separated by 24 nucleotidesECOLIN_RS32470 and ECOLIN_RS00560 are separated by 155 nucleotidesECOLIN_RS00560 and ECOLIN_RS00565 are separated by 34 nucleotidesECOLIN_RS00565 and ECOLIN_RS00570 overlap by 11 nucleotides ECOLIN_RS00555: ECOLIN_RS00555 - dephospho-CoA kinase, at 115,684 to 116,304 _RS00555 ECOLIN_RS32470: ECOLIN_RS32470 - protein YacM, at 116,329 to 116,373 _RS32470 ECOLIN_RS00560: ECOLIN_RS00560 - GMP reductase, at 116,529 to 117,572 _RS00560 ECOLIN_RS00565: ECOLIN_RS00565 - protein transport protein HofC, at 117,607 to 118,809 _RS00565 ECOLIN_RS00570: ECOLIN_RS00570 - type II secretion system protein GspE, at 118,799 to 120,184 _RS00570
Group Condition ECOLIN_RS00555 ECOLIN_RS32470 ECOLIN_RS00560 ECOLIN_RS00565 ECOLIN_RS00570
carbon source Casamino-acids N.D. N.D. -0.9 -0.1 -0.4
phage JK38 N.D. N.D. -0.4 -0.1 -0.6
phage Bas38 N.D. N.D. -0.7 -0.2 +0.3
carbon source Sodium-DL-Lactate N.D. N.D. -0.5 -0.3 +0.4
phage Bas52 N.D. N.D. +0.9 -0.1 -0.4
phage Bas48 N.D. N.D. +1.0 -0.3 -0.3
carbon source D-Glucose N.D. N.D. +0.9 -0.2 -0.2
phage Bas05 N.D. N.D. +1.2 -0.2 -0.5
phage Phi92 N.D. N.D. +1.1 +0.1 -0.7
phage K25 N.D. N.D. +1.0 -0.1 -0.2
phage Bas31 N.D. N.D. +1.1 -0.1 -0.2
phage K25 N.D. N.D. +1.1 -0.1 -0.2
phage RB68 N.D. N.D. +1.4 -0.1 -0.5
phage Bas68 N.D. N.D. +1.3 -0.1 -0.4
phage Bas63 N.D. N.D. +1.2 +0.0 -0.4
phage CEV1 N.D. N.D. +1.5 -0.1 -0.7
phage Phi92 N.D. N.D. +1.0 -0.0 -0.2
phage Bas68 N.D. N.D. +1.4 -0.4 -0.1
phage Bas22 N.D. N.D. +1.5 -0.1 -0.3
phage K20 N.D. N.D. +1.7 -0.3 -0.2
phage Bas31 N.D. N.D. +1.8 -0.2 -0.2
phage Bas52 N.D. N.D. +1.5 +0.1 -0.1
phage Bas04 N.D. N.D. +1.6 -0.2 +0.1
no phage control Control_Nissle N.D. N.D. +2.0 -0.3 -0.2
phage Bas22 N.D. N.D. +1.6 +0.2 -0.2
phage Bas63 N.D. N.D. +1.8 +0.0 -0.2
phage Bas05 N.D. N.D. +1.5 +0.2 -0.0
no phage control Control_Nissle N.D. N.D. +2.5 -0.2 -0.4
phage Bas04 N.D. N.D. +1.8 +0.1 +0.2
phage Bas51 N.D. N.D. +1.7 +0.2 +0.2
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