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Protein
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Fitness for 5 genes in
Escherichia coli Nissle 1917
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500 nt
ECOLIN_RS32465 and ECOLIN_RS00415 are separated by 118 nucleotides
ECOLIN_RS00415 and ECOLIN_RS00420 are separated by 2 nucleotides
ECOLIN_RS00420 and ECOLIN_RS00425 are separated by 11 nucleotides
ECOLIN_RS00425 and ECOLIN_RS00430 are separated by 81 nucleotides
ECOLIN_RS32465: ECOLIN_RS32465 - hypothetical protein, at 87,246 to 87,284
_RS32465
ECOLIN_RS00415: ECOLIN_RS00415 - acetolactate synthase 3 large subunit, at 87,403 to 89,127
_RS00415
ECOLIN_RS00420: ECOLIN_RS00420 - acetolactate synthase small subunit, at 89,130 to 89,621
_RS00420
ECOLIN_RS00425: ECOLIN_RS00425 - fruR/shl operon leader peptide, at 89,633 to 89,719
_RS00425
ECOLIN_RS00430: ECOLIN_RS00430 - catabolite repressor/activator, at 89,801 to 90,805
_RS00430
Group
Condition
ECOLIN
_RS32465
ECOLIN
_RS00415
ECOLIN
_RS00420
ECOLIN
_RS00425
ECOLIN
_RS00430
carbon source
Sodium-DL-Lactate
N.D.
-0.1
-0.1
N.D.
-7.5
phage
TP7
N.D.
-0.2
-0.2
N.D.
-5.1
carbon source
Sodium-DL-Lactate
N.D.
+0.1
-0.4
N.D.
-4.5
phage
JK38
N.D.
-0.2
-0.2
N.D.
-3.2
phage
Bas37
N.D.
+0.0
+0.3
N.D.
-3.5
phage
Bas37
N.D.
+0.1
+0.1
N.D.
-3.1
phage
TP7
N.D.
-0.2
+0.0
N.D.
-2.7
carbon source
Casamino-acids
N.D.
+0.1
+0.1
N.D.
-2.9
phage
Bas45
N.D.
-0.1
-0.1
N.D.
-2.5
phage
Bas31
N.D.
-0.2
-0.1
N.D.
-2.4
carbon source
Casamino-acids
N.D.
-0.0
-0.2
N.D.
-2.4
phage
P1vir
N.D.
+0.1
-0.1
N.D.
-2.4
phage
JK38
N.D.
-0.1
+0.0
N.D.
-2.2
phage
EV219
N.D.
+0.1
-0.0
N.D.
-2.1
phage
EV219
N.D.
+0.1
-0.1
N.D.
-1.9
phage
Bas31
N.D.
-0.1
+0.1
N.D.
-1.8
phage
Bas27
N.D.
-0.1
-0.3
N.D.
-1.3
phage
Bas27
N.D.
-0.2
+0.0
N.D.
-1.5
carbon source
L-Rhamnose
N.D.
-0.0
-0.8
N.D.
-0.8
phage
RB51
N.D.
-0.0
-0.1
N.D.
-1.4
carbon source
L-Rhamnose
N.D.
-0.0
-0.2
N.D.
-1.3
phage
JK16
N.D.
+0.1
+0.0
N.D.
-1.5
phage
Phi92
N.D.
-0.0
-0.3
N.D.
-1.0
phage
Bas63
N.D.
-0.2
-0.3
N.D.
-0.8
phage
Bas52
N.D.
+0.1
-0.8
N.D.
-0.5
phage
Bas38
N.D.
-0.1
+0.1
N.D.
-1.2
phage
Bas10
N.D.
-0.1
-0.3
N.D.
-0.8
phage
Bas51
N.D.
+0.1
-0.3
N.D.
-0.9
phage
K20
N.D.
+0.1
-0.3
N.D.
-0.7
phage
Phi92
N.D.
-0.0
+0.3
N.D.
-1.1
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