Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00350 and ECOLIN_RS00355 are separated by 154 nucleotidesECOLIN_RS00355 and ECOLIN_RS00360 are separated by 113 nucleotidesECOLIN_RS00360 and ECOLIN_RS00365 overlap by 17 nucleotidesECOLIN_RS00365 and ECOLIN_RS00370 overlap by 25 nucleotides ECOLIN_RS00350: ECOLIN_RS00350 - hypothetical protein, at 73,754 to 74,176 _RS00350 ECOLIN_RS00355: ECOLIN_RS00355 - DedA family protein, at 74,331 to 75,095 _RS00355 ECOLIN_RS00360: ECOLIN_RS00360 - thiamine ABC transporter ATP-binding protein ThiQ, at 75,209 to 75,907 _RS00360 ECOLIN_RS00365: ECOLIN_RS00365 - thiamine/thiamine pyrophosphate ABC transporter permease ThiP, at 75,891 to 77,501 _RS00365 ECOLIN_RS00370: ECOLIN_RS00370 - thiamine ABC transporter substrate binding subunit, at 77,477 to 78,460 _RS00370
Group Condition ECOLIN_RS00350 ECOLIN_RS00355 ECOLIN_RS00360 ECOLIN_RS00365 ECOLIN_RS00370
phage P1vir +0.2 -1.1 -0.7 -0.4 +0.2
phage Bas22 -0.1 -0.5 -0.9 -0.4 +0.0
phage Bas52 +0.0 -0.6 -0.5 -0.3 -0.5
carbon source L-Rhamnose +0.0 -0.4 -1.9 +0.2 +0.3
phage Bas22 +0.0 -0.2 -1.0 -0.3 -0.2
phage K20 -0.4 +0.1 -0.9 -0.2 -0.2
phage Bas68 -0.0 -0.3 -0.3 -0.6 -0.2
phage Bas45 -0.2 -0.4 -0.3 -0.5 +0.0
carbon source Sodium-DL-Lactate -0.0 -0.1 -0.3 -0.4 -0.4
carbon source D-Glucose -0.3 -0.2 +0.5 -0.6 -0.7
phage K25 +0.1 +0.1 -1.0 -0.3 +0.0
phage RB51 +0.2 +0.1 -1.2 -0.2 -0.1
phage Bas48 -0.1 -0.1 -0.9 -0.3 +0.2
phage Bas52 +0.2 -0.8 -0.2 -0.4 -0.0
carbon source D-Glucose -0.2 +0.3 -0.1 -0.4 -0.6
phage K25 +0.3 -0.3 -0.5 -0.2 -0.2
phage JK16 -0.1 -0.1 -0.9 -0.2 +0.4
phage Bas68 +0.2 +0.2 -0.7 -0.4 -0.1
phage Phi92 +0.1 +0.0 -1.0 -0.3 +0.4
carbon source L-Rhamnose +0.1 +0.2 -0.4 +0.3 -0.8
phage Bas51 +0.4 -0.3 -0.9 -0.1 +0.2
carbon source Sodium-DL-Lactate +0.1 +0.3 -0.2 -0.2 -0.6
carbon source Casamino-acids -0.2 +0.3 +0.3 -0.1 -0.7
phage Bas21 +0.1 -0.6 +0.4 -0.1 -0.1
phage Bas44 +0.4 +0.1 -0.1 -0.2 -0.5
no phage control Control_Nissle +0.3 +0.1 -0.5 -0.3 +0.2
carbon source Casamino-acids -0.3 +0.3 +0.4 +0.1 -0.4
carbon source L-Arabinose -0.3 +0.5 +0.2 +0.3 -0.2
carbon source L-Arabinose +0.1 +0.3 +0.3 +0.4 -0.2
phage RB51 +0.2 +0.3 +0.4 -0.1 +0.5
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