Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00195 and ECOLIN_RS00200 are separated by 5 nucleotidesECOLIN_RS00200 and ECOLIN_RS00205 are separated by 108 nucleotidesECOLIN_RS00205 and ECOLIN_RS00210 are separated by 72 nucleotidesECOLIN_RS00210 and ECOLIN_RS00215 are separated by 127 nucleotides ECOLIN_RS00195: ECOLIN_RS00195 - carnitine operon protein CaiE, at 36,771 to 37,361 _RS00195 ECOLIN_RS00200: ECOLIN_RS00200 - crotonobetainyl-CoA hydratase, at 37,367 to 38,152 _RS00200 ECOLIN_RS00205: ECOLIN_RS00205 - crotonobetaine/carnitine-CoA ligase, at 38,261 to 39,814 _RS00205 ECOLIN_RS00210: ECOLIN_RS00210 - L-carnitine CoA-transferase, at 39,887 to 41,104 _RS00210 ECOLIN_RS00215: ECOLIN_RS00215 - crotonobetainyl-CoA dehydrogenase, at 41,232 to 42,374 _RS00215
Group Condition ECOLIN_RS00195 ECOLIN_RS00200 ECOLIN_RS00205 ECOLIN_RS00210 ECOLIN_RS00215
phage Bas44 -0.1 -0.5 -0.1 -0.1 -0.6
phage RB51 -0.1 -0.4 -0.3 -0.2 -0.0
phage RB51 -0.0 -0.1 -0.1 -0.3 -0.4
phage Bas44 -0.1 -0.5 +0.1 -0.2 -0.2
no phage control Control_Nissle +0.1 -0.2 -0.4 -0.2 -0.1
phage Bas04 -0.1 -0.1 -0.2 -0.0 -0.4
phage Bas52 +0.3 -0.1 -0.2 -0.2 -0.5
phage RB68 +0.2 -0.4 +0.1 -0.2 -0.4
carbon source L-Arabinose +0.1 -0.6 -0.1 +0.0 -0.1
carbon source L-Rhamnose -0.5 -0.2 +0.1 -0.1 +0.2
phage Bas68 -0.1 -0.1 +0.1 -0.3 -0.2
phage Bas04 +0.2 -0.1 -0.3 -0.0 -0.1
phage Bas38 +0.2 -0.0 -0.0 -0.3 -0.1
phage Bas38 +0.0 +0.1 -0.1 -0.2 -0.1
phage TP7 +0.0 -0.1 +0.2 -0.1 -0.3
phage Bas31 +0.1 -0.3 +0.1 +0.1 -0.3
phage Bas51 +0.1 -0.1 +0.1 -0.1 -0.3
phage K20 -0.1 -0.2 -0.1 -0.1 +0.2
phage Phi92 -0.2 -0.2 -0.1 +0.2 +0.2
phage Bas48 +0.1 -0.4 -0.2 +0.1 +0.3
carbon source Casamino-acids -0.1 -0.4 +0.0 +0.2 +0.1
phage JK38 +0.3 -0.0 -0.1 -0.1 -0.1
phage JK16 +0.1 +0.3 -0.0 -0.0 -0.3
phage Bas63 -0.1 +0.3 +0.2 -0.2 -0.0
phage Bas10 +0.3 +0.1 -0.1 +0.0 -0.2
phage Bas37 +0.1 +0.1 -0.1 -0.1 +0.2
phage K25 -0.1 +0.0 +0.4 +0.1 -0.1
carbon source Casamino-acids -0.2 +0.2 +0.0 +0.0 +0.3
phage CEV1 +0.4 +0.1 -0.1 +0.0 +0.1
carbon source L-Rhamnose +0.5 -0.2 +0.0 -0.0 +0.5
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