Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00155 and ECOLIN_RS00160 are separated by 160 nucleotidesECOLIN_RS00160 and ECOLIN_RS00175 are separated by 455 nucleotidesECOLIN_RS00175 and ECOLIN_RS00180 are separated by 17 nucleotidesECOLIN_RS00180 and ECOLIN_RS00190 are separated by 260 nucleotides ECOLIN_RS00155: ECOLIN_RS00155 - DUF805 domain-containing protein, at 29,806 to 30,171 _RS00155 ECOLIN_RS00160: ECOLIN_RS00160 - 4-hydroxy-tetrahydrodipicolinate reductase, at 30,332 to 31,153 _RS00160 ECOLIN_RS00175: ECOLIN_RS00175 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 31,609 to 32,757 _RS00175 ECOLIN_RS00180: ECOLIN_RS00180 - carbamoyl-phosphate synthase large subunit, at 32,775 to 35,996 _RS00180 ECOLIN_RS00190: ECOLIN_RS00190 - carnitine metabolism transcriptional regulator CaiF, at 36,257 to 36,652 _RS00190
Group Condition ECOLIN_RS00155 ECOLIN_RS00160 ECOLIN_RS00175 ECOLIN_RS00180 ECOLIN_RS00190
carbon source D-Glucose +0.1 N.D. -4.8 -3.6 -0.1
carbon source D-Glucose -0.5 N.D. -3.4 -3.7 -0.1
carbon source Sodium-DL-Lactate +0.3 N.D. -3.7 -2.6 -0.0
carbon source Sodium-DL-Lactate +0.3 N.D. -2.9 -3.1 -0.2
carbon source Casamino-acids -0.3 N.D. -2.3 -2.8 -0.3
carbon source Casamino-acids -0.3 N.D. -2.3 -2.4 -0.3
carbon source L-Arabinose -0.2 N.D. -1.8 -2.2 -0.2
carbon source L-Rhamnose +0.3 N.D. -1.4 -1.3 -0.3
carbon source L-Arabinose -0.4 N.D. -1.0 -1.1 -0.1
phage RB51 -0.9 N.D. -1.0 -0.3 +0.0
carbon source L-Rhamnose -0.0 N.D. -1.7 -0.3 -0.1
phage Bas51 -1.0 N.D. -0.2 -0.1 -0.2
phage Bas44 -0.7 N.D. -0.1 -0.2 -0.5
phage Bas48 -0.8 N.D. -0.1 -0.2 -0.2
phage K25 -0.6 N.D. -0.6 -0.1 -0.0
no phage control Control_Nissle -0.5 N.D. -0.3 -0.1 -0.3
phage P1vir -0.8 N.D. -0.7 +0.0 +0.2
phage Bas63 -0.8 N.D. -0.3 -0.2 +0.1
phage K20 -0.4 N.D. -0.2 -0.1 -0.4
phage Bas21 -0.9 N.D. -0.1 +0.2 -0.2
phage Bas31 -0.5 N.D. +0.1 -0.0 -0.6
phage Bas52 -0.6 N.D. -0.2 -0.1 +0.3
phage Bas48 -0.6 N.D. +0.0 -0.3 +0.3
phage JK16 -1.0 N.D. +0.1 -0.1 +0.4
phage Bas31 -0.9 N.D. +0.2 -0.0 +0.1
phage CEV1 -0.7 N.D. -0.1 +0.0 +0.3
phage Bas27 -0.8 N.D. +0.2 -0.1 +0.3
phage Bas04 -0.8 N.D. +0.4 +0.0 +0.0
phage EV219 -0.6 N.D. +0.5 +0.1 -0.3
phage TP7 -0.6 N.D. +0.2 -0.0 +0.3
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