Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00015 and ECOLIN_RS00020 are separated by 0 nucleotidesECOLIN_RS00020 and ECOLIN_RS00030 are separated by 213 nucleotidesECOLIN_RS00030 and ECOLIN_RS00035 are separated by 59 nucleotidesECOLIN_RS00035 and ECOLIN_RS00040 are separated by 69 nucleotides ECOLIN_RS00015: ECOLIN_RS00015 - homoserine kinase, at 2,825 to 3,757 _RS00015 ECOLIN_RS00020: ECOLIN_RS00020 - threonine synthase, at 3,758 to 5,044 _RS00020 ECOLIN_RS00030: ECOLIN_RS00030 - DUF2502 domain-containing protein, at 5,258 to 5,554 _RS00030 ECOLIN_RS00035: ECOLIN_RS00035 - peroxide stress protein YaaA, at 5,614 to 6,390 _RS00035 ECOLIN_RS00040: ECOLIN_RS00040 - sodium:alanine symporter family protein, at 6,460 to 7,890 _RS00040
Group Condition ECOLIN_RS00015 ECOLIN_RS00020 ECOLIN_RS00030 ECOLIN_RS00035 ECOLIN_RS00040
carbon source Sodium-DL-Lactate -5.2 -6.0 +0.2 +0.0 -0.2
carbon source Sodium-DL-Lactate -4.5 -5.0 +0.3 +0.1 +0.0
carbon source L-Rhamnose -1.7 -1.0 -0.6 +0.0 +0.2
phage Bas37 -1.5 -0.3 -0.3 -0.2 -0.1
phage JK38 -0.7 -0.4 -0.7 -0.2 -0.1
phage TP7 -0.9 -0.5 -0.4 -0.2 -0.1
phage Bas37 -0.6 -0.5 -0.6 -0.2 -0.2
phage Bas38 -0.8 -0.5 -0.5 -0.2 -0.1
phage Bas27 -0.5 -0.1 -0.6 -0.3 -0.3
phage JK38 -0.5 -0.5 -0.5 -0.3 +0.0
phage Phi92 -0.7 -0.4 -0.4 -0.2 -0.0
phage TP7 -0.9 -0.1 -0.2 -0.2 -0.2
phage Bas31 -0.6 -0.5 +0.1 -0.6 -0.1
phage P1vir -0.3 -0.2 -0.6 -0.4 -0.1
phage Bas04 -0.4 -0.3 -0.2 -0.3 -0.1
phage Bas04 +0.1 -0.5 -0.4 -0.3 -0.2
phage Bas21 -0.5 +0.1 -0.5 -0.4 +0.0
phage JK16 -0.5 -0.2 -0.4 -0.2 +0.1
phage K25 -0.3 -0.5 -0.3 +0.2 -0.0
phage Bas51 -0.7 -0.2 +0.2 -0.0 -0.1
phage CEV1 +0.2 -0.3 -0.5 -0.1 -0.1
no phage control Control_Nissle +0.2 -0.2 -0.9 +0.2 -0.1
carbon source L-Arabinose -0.2 -0.7 +0.3 -0.2 +0.0
phage Bas27 -0.6 +0.2 +0.2 -0.3 -0.0
phage Bas52 -0.7 -0.0 +0.4 -0.1 -0.0
phage Bas21 +0.2 -0.4 +0.3 -0.2 -0.1
phage RB68 +0.6 -0.4 -0.2 -0.1 +0.0
phage Bas63 +0.2 -0.2 +0.4 -0.2 -0.3
carbon source D-Glucose +0.7 +1.5 +0.7 -0.3 -0.4
carbon source D-Glucose +1.2 +2.9 +0.2 -0.0 -0.1
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