Fitness for 5 genes in Escherichia coli Nissle 1917

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500 ntECOLIN_RS00005 and ECOLIN_RS00010 are separated by 105 nucleotidesECOLIN_RS00010 and ECOLIN_RS00015 are separated by 1 nucleotidesECOLIN_RS00015 and ECOLIN_RS00020 are separated by 0 nucleotidesECOLIN_RS00020 and ECOLIN_RS00030 are separated by 213 nucleotides ECOLIN_RS00005: ECOLIN_RS00005 - thr operon leader peptide, at 190 to 255 _RS00005 ECOLIN_RS00010: ECOLIN_RS00010 - bifunctional aspartate kinase/homoserine dehydrogenase I, at 361 to 2,823 _RS00010 ECOLIN_RS00015: ECOLIN_RS00015 - homoserine kinase, at 2,825 to 3,757 _RS00015 ECOLIN_RS00020: ECOLIN_RS00020 - threonine synthase, at 3,758 to 5,044 _RS00020 ECOLIN_RS00030: ECOLIN_RS00030 - DUF2502 domain-containing protein, at 5,258 to 5,554 _RS00030
Group Condition ECOLIN_RS00005 ECOLIN_RS00010 ECOLIN_RS00015 ECOLIN_RS00020 ECOLIN_RS00030
carbon source Sodium-DL-Lactate -1.4 -2.6 -5.2 -6.0 +0.2
carbon source Sodium-DL-Lactate -1.3 -2.7 -4.5 -5.0 +0.3
carbon source L-Rhamnose -0.5 -0.3 -1.7 -1.0 -0.6
phage JK38 -0.7 -0.1 -0.7 -0.4 -0.7
phage K25 -1.2 -0.1 -0.3 -0.5 -0.3
phage Bas38 -0.4 -0.2 -0.8 -0.5 -0.5
phage Bas37 +0.1 -0.2 -1.5 -0.3 -0.3
phage Bas38 -1.0 -0.3 -0.1 -0.6 -0.1
phage K25 -1.0 -0.1 -0.0 -0.4 -0.2
phage TP7 -0.2 -0.3 -0.9 -0.1 -0.2
phage Bas04 -0.8 -0.1 +0.1 -0.5 -0.4
phage JK38 +0.3 -0.3 -0.5 -0.5 -0.5
carbon source L-Rhamnose -0.3 -0.3 -0.7 -0.3 -0.1
phage TP7 +0.6 -0.3 -0.9 -0.5 -0.4
phage JK16 -0.5 -0.1 -0.2 -0.3 -0.5
phage Bas37 +0.4 -0.2 -0.6 -0.5 -0.6
phage Bas31 -0.2 -0.1 -0.6 -0.5 +0.1
phage Phi92 +0.4 -0.1 -0.7 -0.4 -0.4
phage Bas52 -0.8 -0.1 +0.1 -0.3 +0.5
no phage control Control_Nissle +0.4 -0.2 +0.2 -0.2 -0.9
carbon source Casamino-acids -0.7 +0.1 +0.4 -0.5 -0.0
phage Bas04 +0.6 -0.2 -0.4 -0.3 -0.2
phage CEV1 +0.5 -0.2 +0.2 -0.3 -0.5
carbon source L-Arabinose -0.4 +0.7 -0.2 -0.7 +0.3
no phage control Control_Nissle +0.8 -0.3 -0.4 +0.1 -0.2
phage RB68 +0.5 -0.2 +0.6 -0.4 -0.2
carbon source L-Arabinose -0.1 +1.0 +0.2 -0.4 -0.0
phage Bas63 +1.0 -0.3 +0.2 -0.2 +0.4
carbon source D-Glucose -1.2 +0.1 +0.7 +1.5 +0.7
carbon source D-Glucose -0.7 -0.2 +1.2 +2.9 +0.2
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